RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ZNF677Q86XU0 584 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 TERB1Q8NA31 727 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 ZBTB44Q8NCP5 570 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 TSTD1Q8NFU3 115 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 USP33Q8TEY7 942 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 BHMTQ93088 406 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 PHOX2BQ99453 314 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 IRX2Q9BZI1 471 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 POLMQ9NP87 494 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 ACP6Q9NPH0 428 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 MYO18AQ92614 2054 aaKnown RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 A0A0A0MRY4 1105 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 PRR23AA6NEV1 266 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 F8VZ95 297 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 GOLGA6L19H0YKK7 550 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 IRAK2O43187 625 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 GREM1O60565 184 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 LSM8O95777 96 aaKnown RBP14.39□□□□□ -0.11
VPS33B-206ENST00000557358 SLC2A3P11169 496 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 TIE1P35590 1138 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 FNTBP49356 437 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 DGKEP52429 567 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 ARID5AQ03989 594 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 NAIF1Q69YI7 327 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-206ENST00000557358 PRR23BQ6ZRT6 265 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 ERICH1Q86X53 443 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 ETFBKMTQ8IXQ9 262 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
VPS33B-206ENST00000557358 CLEC4CQ8WTT0 213 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 RNF34Q969K3 372 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 WBP2Q969T9 261 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 SLC2A11Q9BYW1 496 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 FAM204AQ9H8W3 233 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 ASNSD1Q9NWL6 643 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 NCDNQ9UBB6 729 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 GMEB2Q9UKD1 530 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 TLR6Q9Y2C9 796 aa14.39□□□□□ -0.11
VPS33B-206ENST00000557358 FAM186AA6NE01 2351 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 K7EQS6 105 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 PAPSS1O43252 624 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 MSI1O43347 362 aaKnown RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 KLF8O95600 359 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 SERPINC1P01008 464 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 KLKB1P03952 638 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 ZNF18P17022 549 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 SOX5P35711 763 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 SIM2Q14190 667 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 GAB4Q2WGN9 574 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 TAF3Q5VWG9 929 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 TRIM72Q6ZMU5 477 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 WDR5BQ86VZ2 330 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 C12orf40Q86WS4 652 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 CCDC33Q8N5R6 958 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 ZNF513Q8N8E2 541 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 DQX1Q8TE96 717 aaKnown RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 NELL1Q92832 810 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 AZIN2Q96A70 460 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 ERGIC2Q96RQ1 377 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 TSPY26PQ9H489 355 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 RRN3Q9NYV6 651 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 PLK2Q9NYY3 685 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 MMP17Q9ULZ9 603 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 PAXBP1Q9Y5B6 917 aa14.38□□□□□ -0.11
VPS33B-206ENST00000557358 RIF1Q5UIP0 2472 aaKnown RBP14.38□□□□□ -0.11
VPS33B-206ENST00000557358 K7ESF4 209 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 NPC1O15118 1278 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 AXIN1O15169 862 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 LILRB5O75023 590 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 GFPT2O94808 682 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 PENKP01210 267 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 PNMA6AP0CW24 399 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 ABCB4P21439 1286 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 NCAPHQ15003 741 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 ANKS1BQ7Z6G8 1248 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 C11orf74Q86VG3 221 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 ATP6V0D2Q8N8Y2 350 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 TXNDC5Q8NBS9 432 aaKnown RBP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 RUBCNQ92622 972 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 C18orf8Q96DM3 657 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 CPXM1Q96SM3 734 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 GANQ9H2C0 597 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 EPC1Q9H2F5 836 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 BCCIPQ9P287 314 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS33B-206ENST00000557358 TJP2Q9UDY2 1190 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 SMG5Q9UPR3 1016 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms