RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 EIF4E1BA6NMX2 242 aaKnown RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 KIF20AO95235 890 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 EPHX1P07099 455 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 HMBSP08397 361 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 ASPAP45381 313 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 AFF3P51826 1226 aaKnown RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 KIF11P52732 1056 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 COG7P83436 770 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 ZNF234Q14588 700 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 SNX19Q92543 992 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 TAF4BQ92750 862 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 CIPCQ9C0C6 399 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 ZSCAN16Q9H4T2 348 aaPredicted RBP12.92□□□□□ -0.34
SNX6-209ENST00000557265 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX6-209ENST00000557265 SLCO1B1Q9Y6L6 691 aa12.92□□□□□ -0.34
SNX6-209ENST00000557265 PVALEFA0A1B0GWK0 134 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 FAM149AA5PLN7 773 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 STX6O43752 255 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 PPP6R2O75170 966 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 ASS1P00966 412 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 RALAP11233 206 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 TRIM21P19474 475 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 PRKCHP24723 683 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 CORO1AP31146 461 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 PSEN1P49768 467 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 EFEMP1Q12805 493 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 EIF4HQ15056 248 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 E2F5Q15329 346 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 ZACNQ401N2 412 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 CCDC157Q569K6 752 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 TMEM215Q68D42 235 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 SERPINA13PQ6UXR4 307 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 SV2AQ7L0J3 742 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 CCDC186Q7Z3E2 898 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 DMAC2Q9NW81 257 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 CLIC5Q9NZA1 410 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 AGO1Q9UL18 857 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
SNX6-209ENST00000557265 SETXQ7Z333 2677 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 URB1O60287 2271 aaKnown RBP12.91□□□□□ -0.34
SNX6-209ENST00000557265 KCNK3O14649 394 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
SNX6-209ENST00000557265 TNFSF14O43557 240 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 TIMM44O43615 452 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 CUTAO60888 179 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 CYBBP04839 570 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 HLA-EP13747 358 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 ACSL1P33121 698 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 AFMP43652 599 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 ARID5AQ03989 594 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 INCA1Q0VD86 236 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
SNX6-209ENST00000557265 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 CUL4BQ13620 913 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 DENND1CQ8IV53 801 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
SNX6-209ENST00000557265 OR2T3Q8NH03 318 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 CDK5RAP1Q96SZ6 601 aaKnown RBP12.9□□□□□ -0.34
SNX6-209ENST00000557265 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 PCED1AQ9H1Q7 454 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 ANKRD6Q9Y2G4 727 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
SNX6-209ENST00000557265 USP3Q9Y6I4 520 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 KNL1Q8NG31 2342 aa12.9□□□□□ -0.34
SNX6-209ENST00000557265 HELZ2Q9BYK8 2649 aaKnown RBP12.9□□□□□ -0.35
SNX6-209ENST00000557265 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 A0A087WV48 116 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 ZIC2O95409 532 aaPredicted RBP12.89□□□□□ -0.35
SNX6-209ENST00000557265 HLA-DRAP01903 254 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 CD58P19256 250 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 PIK3CAP42336 1068 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 GRK6P43250 576 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 TEAD4Q15561 434 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
SNX6-209ENST00000557265 LAYNQ6UX15 382 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 SLC9A9Q8IVB4 645 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 SCUBE3Q8IX30 993 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
SNX6-209ENST00000557265 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 DUSP16Q9BY84 665 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 LHX5Q9H2C1 402 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms