RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 LRRIQ3A6PVS8 624 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 NPC1O15118 1278 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 VNN1O95497 513 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 C4BPAP04003 597 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 ACADMP11310 421 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 SYT1P21579 422 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 PRKCHP24723 683 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CASP1P29466 404 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 ASPAP45381 313 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 AFF3P51826 1226 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 ZNF132P52740 706 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CLDN10P78369 228 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 AMPD3Q01432 767 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 EHHADHQ08426 723 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 ZNF234Q14588 700 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 SCD5Q86SK9 330 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 C12orf56Q8IXR9 622 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 GALNT15Q8N3T1 639 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 UCMAQ8WVF2 138 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 DHX58Q96C10 678 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 PIWIL1Q96J94 861 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 TWNKQ96RR1 684 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CIPCQ9C0C6 399 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CUEDC2Q9H467 287 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-227ENST00000556897 CKAP5Q14008 2032 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 KCNK3O14649 394 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 TNFSF14O43557 240 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 EPHX1P07099 455 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 HMBSP08397 361 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 P4HA1P13674 534 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 HLA-EP13747 358 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CORO1AP31146 461 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ACSL1P33121 698 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CHKAP35790 457 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 KIF11P52732 1056 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 AP3M2P53677 418 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 DLG4P78352 724 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 SMAD1Q15797 465 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 PTPRNQ16849 979 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 KNOP1Q1ED39 458 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ERICH6BQ5W0A0 696 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 TMEM215Q68D42 235 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 SPOPLQ6IQ16 392 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 LAYNQ6UX15 382 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 SERPINA13PQ6UXR4 307 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 UNC13DQ70J99 1090 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ANKS1BQ7Z6G8 1248 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 DENND1CQ8IV53 801 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 HNRNPABQ99729 332 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 C7orf25Q9BPX7 421 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 BLZF1Q9H2G9 400 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 C6orf106Q9H6K1 298 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 SLC39A2Q9NP94 309 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ELOVL2Q9NXB9 296 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 CGNQ9P2M7 1197 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 PCDHA5Q9Y5H7 936 aa9.48□□□□□ -0.89
HNRNPC-227ENST00000556897 PTPRQQ9UMZ3 2332 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 KIF20AO95235 890 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 PRB1P04280 392 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 RPN1P04843 607 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 RALAP11233 206 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 GRK6P43250 576 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 NASPP49321 788 aaPredicted RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 PSEN1P49768 467 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 COG7P83436 770 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 IL9RQ01113 521 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 EFEMP1Q12805 493 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 CUL4AQ13619 759 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 EIF4HQ15056 248 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 STK38Q15208 465 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 TEAD4Q15561 434 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ZACNQ401N2 412 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 DHRS13Q6UX07 377 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 SCUBE3Q8IX30 993 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 IQUBQ8NA54 791 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 RBBP8NLQ8NC74 664 aaPredicted RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 LINC00301Q8NCQ3 95 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 PIP4K2CQ8TBX8 421 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 DDI1Q8WTU0 396 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms