RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CD6P30203 668 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 PGDP52209 483 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ZNF134P52741 427 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ACTR2P61160 394 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 TUBA4AP68366 448 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 CCNIQ14094 377 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 RPS6KA2Q15349 733 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 HYIQ5T013 277 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 MANEALQ5VSG8 457 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ICE2Q659A1 982 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 FAAH2Q6GMR7 532 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 TMPRSS9Q7Z410 1059 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ESX1Q8N693 406 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 DNAJB14Q8TBM8 379 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 SNX19Q92543 992 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ZDHHC12Q96GR4 267 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 HIST1H2AAQ96QV6 131 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 SH2D3AQ9BRG2 576 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 BRD8Q9H0E9 1235 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 CXorf36Q9H7Y0 433 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 PRDM8Q9NQV8 689 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 KLC4Q9NSK0 619 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 IFT80Q9P2H3 777 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 NFU1Q9UMS0 254 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 USP22Q9UPT9 525 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 MRPS17Q9Y2R5 130 aaKnown RBP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 CCDC196A0A1B0GTZ2 297 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 OR2W5A6NFC9 320 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 GCOM1H8Y6P7 765 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 PCDH17O14917 1159 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 CD3EAPO15446 510 aaKnown RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 MOSPD3O75425 235 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 MBD4O95243 580 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NTN1O95631 604 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 POLBP06746 335 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 CENPBP07199 599 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NHLRC4P0CG21 123 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NR2F6P10588 404 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 GYS1P13807 737 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TNFAIP3P21580 790 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 DRD4P21917 467 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 EPHA3P29320 983 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 ELF1P32519 619 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NPTX2P47972 431 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TOB1P50616 345 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 PDE6CP51160 858 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TLE2Q04725 743 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TRPC3Q13507 836 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 FHL1Q13642 323 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 SIM2Q14190 667 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 FAM110CQ1W6H9 321 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 ZIK1Q3SY52 487 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 SUPT20HL1Q3ZLR7 823 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 SUMO4Q6EEV6 95 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 RGS7BPQ6MZT1 257 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 YTHDF3Q7Z739 585 aaKnown RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 NEK8Q86SG6 692 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TICAM2Q86XR7 235 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 MBD3L2Q8NHZ7 208 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 ATRIPQ8WXE1 791 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 CPT1BQ92523 772 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 GOLGA1Q92805 767 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 RFKQ969G6 155 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 C3orf49Q96BT1 292 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 DDX23Q9BUQ8 820 aaKnown RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 QTRT1Q9BXR0 403 aaKnown RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 SMOC2Q9H3U7 446 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 ELAC1Q9H777 363 aaKnown RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 GBA2Q9HCG7 927 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 LPAR3Q9UBY5 353 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 FBXO2Q9UK22 296 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 FEM1BQ9UK73 627 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 C19orf53Q9UNZ5 99 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-210ENST00000556718 SCINQ9Y6U3 715 aa4.91□□□□□ -1.62
PRPF39-210ENST00000556718 TARM1B6A8C7 271 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 J3KTA2 159 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 TTLL1O95922 423 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 PRKCBP05771 671 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 CKMT1AP12532 417 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 RBL1P28749 1068 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 GATMP50440 423 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 NXPH1P58417 271 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 UBE3AQ05086 875 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 TUBB3Q13509 450 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 CUL4BQ13620 913 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 SLC12A1Q13621 1099 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 CSHL1Q14406 222 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 PTCHD3Q3KNS1 767 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 RBM20Q5T481 1227 aaKnown RBP4.9□□□□□ -1.63
PRPF39-210ENST00000556718 L1TD1Q5T7N2 865 aaKnown RBP4.9□□□□□ -1.63
PRPF39-210ENST00000556718 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 ABLIM2Q6H8Q1 611 aa4.9□□□□□ -1.63
PRPF39-210ENST00000556718 CRELD2Q6UXH1 353 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-210ENST00000556718 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
PRPF39-210ENST00000556718 TMEM57Q8N5G2 664 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms