RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 FYB2Q5VWT5 728 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 NUGGCQ68CJ6 796 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 BHLHA9Q7RTU4 235 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 STK32AQ8WU08 396 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 HMGB4Q8WW32 186 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 ZNF606Q8WXB4 792 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 MED15Q96RN5 788 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 DDX50Q9BQ39 737 aaKnown RBP11.27□□□□□ -0.61
XRCC3-216ENST00000556682 ZSWIM1Q9BR11 485 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 SLC2A11Q9BYW1 496 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 MIS12Q9H081 205 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 DUSP15Q9H1R2 295 aaPredicted RBP11.27□□□□□ -0.61
XRCC3-216ENST00000556682 SLC27A6Q9Y2P4 619 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.27□□□□□ -0.61
XRCC3-216ENST00000556682 DMDP11532 3685 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 GVINP1Q7Z2Y8 2422 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ANTXRLA6NF34 631 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 PRRT4C9JH25 899 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 PIK3R2O00459 728 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 CAPN9O14815 690 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 THAP12O43422 761 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 NCAM1P13591 858 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 HNRNPLP14866 589 aaKnown RBP eCLIP11.26□□□□□ -0.61
XRCC3-216ENST00000556682 SLC9A1P19634 815 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 PON1P27169 355 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 MPLP40238 635 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 GPD2P43304 727 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 SLC11A2P49281 568 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 SNX16P57768 344 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 CREB5Q02930 508 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ARID5AQ03989 594 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 PTK2Q05397 1052 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 STARD3Q14849 445 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ARHGAP44Q17R89 818 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 SPDYCQ5MJ68 293 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 EGFLAMQ63HQ2 1017 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 MSANTD2Q6P1R3 559 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 TOGARAM2Q6ZUX3 1019 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ANKS1BQ7Z6G8 1248 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 IRF2BP1Q8IU81 584 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 FAM149B1Q96BN6 582 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 TMA16Q96EY4 203 aaKnown RBP11.26□□□□□ -0.61
XRCC3-216ENST00000556682 NOX5Q96PH1 765 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
XRCC3-216ENST00000556682 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 VPS45Q9NRW7 570 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 STOML2Q9UJZ1 356 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 INVSQ9Y283 1065 aa11.26□□□□□ -0.61
XRCC3-216ENST00000556682 CFAP54Q96N23 3096 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 TYW5A2RUC4 315 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 PES1O00541 588 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 ZNF217O75362 1048 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 CAVIN2O95810 425 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 CALCAP01258 141 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 P2RY2P41231 377 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 DPP6P42658 865 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 WASP42768 502 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 RPL34P49207 117 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 ATXN1P54253 815 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 TBX4P57082 545 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 BPIFB4P59827 614 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 RING1Q06587 406 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 NNTQ13423 1086 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 EIF4HQ15056 248 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 VWA3BQ502W6 1294 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 PMS2CLQ68D20 193 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 BEND5Q7L4P6 421 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 CCDC117Q8IWD4 279 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 FAM217AQ8IXS0 508 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 ZNF557Q8N988 423 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 OLIG1Q8TAK6 271 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
XRCC3-216ENST00000556682 AZIN2Q96A70 460 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 SERPINB11Q96P15 392 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 GABRG3Q99928 467 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 NDST4Q9H3R1 872 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 LMBRD1Q9NUN5 540 aa11.25□□□□□ -0.61
XRCC3-216ENST00000556682 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
XRCC3-216ENST00000556682 SLC30A4O14863 429 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 IRAK2O43187 625 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 MSI1O43347 362 aaKnown RBP11.24□□□□□ -0.61
XRCC3-216ENST00000556682 SYNCRIPO60506 623 aaKnown RBP11.24□□□□□ -0.61
XRCC3-216ENST00000556682 TSPAN3O60637 253 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 GABBR2O75899 941 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 TPM2P07951 284 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 KRT9P35527 623 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 DHPSP49366 369 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-216ENST00000556682 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 MPP7Q5T2T1 576 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 IL31Q6EBC2 164 aa11.24□□□□□ -0.61
XRCC3-216ENST00000556682 DENND1BQ6P3S1 775 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms