RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 SLC29A4Q7RTT9 530 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 ZNF804AQ7Z570 1209 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 RASAL3Q86YV0 1011 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 OR4N4Q8N0Y3 316 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 FAM71DQ8N9W8 422 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 NPIPB3Q92617 1050 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 FAR2Q96K12 515 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 MMS19Q96T76 1030 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 PRRX2Q99811 253 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 PYM1Q9BRP8 204 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 THAP7Q9BT49 309 aaPredicted RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 CIPCQ9C0C6 399 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 KCNK9Q9NPC2 374 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 RXFP3Q9NSD7 469 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 LIN7CQ9NUP9 197 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 C9orf78Q9NZ63 289 aaPredicted RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 KCND3Q9UK17 655 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 VPS4AQ9UN37 437 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 LRRFIP2Q9Y608 721 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 RRN3P2A6NIE6 340 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 MGST3O14880 152 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 EIF5BO60841 1220 aaKnown RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 FZD7O75084 574 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 TK1P04183 234 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 CKMT1AP12532 417 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 RXRAP19793 462 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 CXCR5P32302 372 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 GALNSP34059 522 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 RARRES1P49788 294 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 CDK7P50613 346 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 COPB1P53618 953 aaKnown RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 FAM3BP58499 235 aaPredicted RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 ACTR2P61160 394 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 CYP4F2P78329 520 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 GPC5P78333 572 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 RAE1P78406 368 aaKnown RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 POU5F1BQ06416 359 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 CCDC15Q0P6D6 951 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 FAM187BQ17R55 369 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 ACSM6Q6P461 480 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 C16orf89Q6UX73 402 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 RINLQ6ZS11 566 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 SYT13Q7L8C5 426 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 GRASPQ7Z6J2 395 aaPredicted RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 HERC6Q8IVU3 1022 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 Q8N1X5 172 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 PAF1Q8N7H5 531 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D5Q92609 795 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 SDCCAG3Q96C92 435 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 MACROD1Q9BQ69 325 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 G6PC2Q9NQR9 355 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 TFCP2L1Q9NZI6 479 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 PACSIN3Q9UKS6 424 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 RAB21Q9UL25 225 aa4.26□□□□□ -1.73
GPHN-214ENST00000556633 TRPC5Q9UL62 973 aaPredicted RBP4.26□□□□□ -1.73
GPHN-214ENST00000556633 FOXN1O15353 648 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 NKX2-8O15522 239 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 EXOC3O60645 756 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 AGR2O95994 175 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 GCP02774 474 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 PYGLP06737 847 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 PEPDP12955 493 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 JAK3P52333 1124 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 PDCLQ13371 301 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 EFR3AQ14156 821 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 SMAD1Q15797 465 aaKnown RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 TBRG1Q3YBR2 411 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 DGAT2L7PQ6IED9 249 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 SYNE3Q6ZMZ3 975 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 MMS22LQ6ZRQ5 1243 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 LRRTM4Q86VH4 590 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 C12orf76Q8N812 135 aaPredicted RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 OR52L2PQ8NGH6 319 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 CEP70Q8NHQ1 597 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 MAFAQ8NHW3 353 aaPredicted RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 USP13Q92995 863 aaPredicted RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 EDC3Q96F86 508 aaKnown RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 COG8Q96MW5 612 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 SNX18Q96RF0 628 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 NAP1L4Q99733 375 aaKnown RBP4.25□□□□□ -1.73
GPHN-214ENST00000556633 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 CHODLQ9H9P2 273 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 RIC8AQ9NPQ8 531 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 IL17RBQ9NRM6 502 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 ABHD10Q9NUJ1 306 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 BAG5Q9UL15 447 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 ENTPD2Q9Y5L3 495 aa4.25□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3DA0A087WVF3 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3IA0A087WXS9 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3EA0A087X179 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3KA0A087X1G2 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3BA6NDS4 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3FA6NER0 549 aaPredicted RBP4.24□□□□□ -1.73
GPHN-214ENST00000556633 FAM90A20PA6NIJ5 464 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 TBC1D3LB9A6J9 549 aa4.24□□□□□ -1.73
GPHN-214ENST00000556633 ZNF213O14771 459 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms