RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OLA1Q9NTK5 396 aaKnown RBP23.65■■□□□ 1.38
ACTN1-220ENST00000556433 ANGPTL2Q9UKU9 493 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 CYP8B1Q9UNU6 501 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 STON1Q9Y6Q2 735 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 ATXN2Q99700 1313 aaKnown RBP23.64■■□□□ 1.38
ACTN1-220ENST00000556433 O00370 1275 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 PPP1R2P41236 205 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 TRIP4Q15650 581 aaPredicted RBP23.64■■□□□ 1.37
ACTN1-220ENST00000556433 BSPRYQ5W0U4 402 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 KLHL10Q6JEL2 608 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 TMEM270Q6UE05 265 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 FMNL3Q8IVF7 1028 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 SIX6OS1Q8N1H7 587 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 CPXM2Q8N436 756 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 DDI1Q8WTU0 396 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 UCMAQ8WVF2 138 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 EDEM1Q92611 657 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 NT5C1BQ96P26 610 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 SLC6A17Q9H1V8 727 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 PCDHB4Q9Y5E5 795 aa23.64■■□□□ 1.37
ACTN1-220ENST00000556433 YJEFN3A6XGL0 299 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 E7ENQ6 273 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 GIPC1O14908 333 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 SETSIPP0DME0 302 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 ZNF33AQ06730 810 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 SH3PXD2AQ5TCZ1 1133 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 SLC23A3Q6PIS1 610 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 LCLAT1Q6UWP7 414 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 KCTD13Q8WZ19 329 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 TFAP2BQ92481 460 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 PIWIL1Q96J94 861 aaKnown RBP23.63■■□□□ 1.37
ACTN1-220ENST00000556433 MRGPRX1Q96LB2 322 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 THAP10Q9P2Z0 257 aaPredicted RBP23.63■■□□□ 1.37
ACTN1-220ENST00000556433 SFMBT1Q9UHJ3 866 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 CLEC4EQ9ULY5 219 aa23.63■■□□□ 1.37
ACTN1-220ENST00000556433 NPC1O15118 1278 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 PMM2O15305 246 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 CFIP05156 583 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 PAEPP09466 180 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 LCP1P13796 627 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 ENGP17813 658 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 HOXD12P35452 270 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 MAPK8P45983 427 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 HARS2P49590 506 aaKnown RBP23.62■■□□□ 1.37
ACTN1-220ENST00000556433 CETN1Q12798 172 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 STARD3Q14849 445 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 PKDCCQ504Y2 493 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 PEAR1Q5VY43 1037 aaPredicted RBP23.62■■□□□ 1.37
ACTN1-220ENST00000556433 KIAA1324Q6UXG2 1013 aaKnown RBP23.62■■□□□ 1.37
ACTN1-220ENST00000556433 FAM217AQ8IXS0 508 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 CEP76Q8TAP6 659 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 NELFBQ8WX92 580 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 ABCC13Q9NSE7 274 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 ELOVL2Q9NXB9 296 aa23.62■■□□□ 1.37
ACTN1-220ENST00000556433 HBS1LQ9Y450 684 aaKnown RBP23.62■■□□□ 1.37
ACTN1-220ENST00000556433 PPP1R3GB7ZBB8 358 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 RNF225M0QZC1 329 aaPredicted RBP23.61■■□□□ 1.37
ACTN1-220ENST00000556433 IL12RB1P42701 662 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 RGS7P49802 495 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 DUOXA1Q1HG43 343 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 TTI2Q6NXR4 508 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 ANKS1BQ7Z6G8 1248 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 PPM1KQ8N3J5 372 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 TRIML1Q8N9V2 468 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 KAT5Q92993 513 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 SLC2A11Q9BYW1 496 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 CNGB3Q9NQW8 809 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 SLC6A14Q9UN76 642 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 PLXND1Q9Y4D7 1925 aa23.61■■□□□ 1.37
ACTN1-220ENST00000556433 TSPAN3O60637 253 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 NDUFS2O75306 463 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 CSRP1P21291 193 aaKnown RBP23.6■■□□□ 1.37
ACTN1-220ENST00000556433 BMP6P22004 513 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 DAOAP59103 153 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 E2F5Q15329 346 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 CNGA2Q16280 664 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 FUT11Q495W5 492 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 MPPE1Q53F39 396 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 SLC41A1Q8IVJ1 513 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 SCML4Q8N228 414 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 SLC35F5Q8WV83 523 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 CIPCQ9C0C6 399 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 PRDM16Q9HAZ2 1276 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 CD93Q9NPY3 652 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 EPG5Q9HCE0 2579 aa23.6■■□□□ 1.37
ACTN1-220ENST00000556433 PI4KAP42356 2102 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 CACNA1BQ00975 2339 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 PIK3R2O00459 728 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 P4HA2O15460 535 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 TIMM44O43615 452 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 SYNCRIPO60506 623 aaKnown RBP23.59■■□□□ 1.37
ACTN1-220ENST00000556433 GABBR2O75899 941 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 ZNF132P52740 706 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 SHC2P98077 582 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 PMF1Q6P1K2 205 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 RRAGAQ7L523 313 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 LMO3Q8TAP4 145 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 ZNF419Q96HQ0 510 aaPredicted RBP23.59■■□□□ 1.37
ACTN1-220ENST00000556433 HSPA12BQ96MM6 686 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 ZSWIM1Q9BR11 485 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms