RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CRTAC1Q9NQ79 661 aa6.19□□□□□ -1.42
PRKCH-220ENST00000556164 CALCOCO1Q9P1Z2 691 aa6.19□□□□□ -1.42
PRKCH-220ENST00000556164 SIX4Q9UIU6 781 aa6.19□□□□□ -1.42
PRKCH-220ENST00000556164 TMEM131Q92545 1883 aa6.19□□□□□ -1.42
PRKCH-220ENST00000556164 GOLGA4Q13439 2230 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 ACACAQ13085 2346 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 A0A0A0MRY4 1105 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 IGHV1OR15-9A0A0B4J2B8 117 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 E2F8A0AVK6 867 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 BHMG1C9JSJ3 638 aaPredicted RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 TULP3O75386 442 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 ASMTLO95671 621 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 OLFM2O95897 454 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 BMP15O95972 392 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 OAS1P00973 400 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SYPP08247 313 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CD59P13987 128 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 HOXB2P14652 356 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 HOXB1P14653 301 aaPredicted RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 IDEP14735 1019 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 GAP43P17677 238 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 GABRG2P18507 467 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CD53P19397 219 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 WARSP23381 471 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 GJB2P29033 226 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 MAN1A1P33908 653 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 WASP42768 502 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CASP5P51878 434 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 NOP14P78316 857 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 GAD2Q05329 585 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 RAPGEF1Q13905 1077 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 HNRNPDQ14103 355 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 TRIP6Q15654 476 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 LONRF2Q1L5Z9 754 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 COL28A1Q2UY09 1125 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 ANO4Q32M45 955 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 ZC3H12BQ5HYM0 836 aaKnown RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 C10orf76Q5T2E6 689 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SV2BQ7L1I2 683 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 PDZD3Q86UT5 571 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 GPD1LQ8N335 351 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 KIAA1958Q8N8K9 716 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 TRIML1Q8N9V2 468 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 OR5B17Q8NGF7 314 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 MYCBPAPQ8TBZ2 947 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 NKD1Q969G9 470 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CEP295NLQ96MC4 621 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 STRA6Q9BX79 667 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SNX25Q9H3E2 840 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 PRDM9Q9NQV7 894 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 PPP4R2Q9NY27 417 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 TBC1D14Q9P2M4 693 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SEL1LQ9UBV2 794 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CCDC39Q9UFE4 941 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 FBXO9Q9UK97 447 aaPredicted RBP6.18□□□□□ -1.42
PRKCH-220ENST00000556164 CYP8B1Q9UNU6 501 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 SH3BP1Q9Y3L3 701 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 PTPRJQ12913 1337 aa6.18□□□□□ -1.42
PRKCH-220ENST00000556164 A0A1W2PQD8 194 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 CLDN5O00501 218 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 HOXC11O43248 304 aaPredicted RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 COCHO43405 550 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 NDUFS2O75306 463 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 ZNF217O75362 1048 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 RFPL3O75679 317 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 RASGRP1O95267 797 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 STAU1O95793 577 aaKnown RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 CAPNS1P04632 268 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 FTH1P19P0C7X4 201 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 IRF1P10914 325 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 YWHAQP27348 245 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 NTSR1P30989 418 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 GNL1P36915 607 aaPredicted RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 CACNA2D1P54289 1103 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 NFKB2Q00653 900 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 DHX9Q08211 1270 aaKnown RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 ALCAMQ13740 583 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 HIF1AQ16665 826 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 DUOXA2Q1HG44 320 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 PREPLQ4J6C6 727 aaPredicted RBP6.17□□□□□ -1.42
PRKCH-220ENST00000556164 HECTD3Q5T447 861 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 GRAMD4Q6IC98 578 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 PPP4R4Q6NUP7 873 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 USP49Q70CQ1 688 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 LIMS2Q7Z4I7 341 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 SLC41A1Q8IVJ1 513 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 NAXDQ8IW45 347 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 BBS7Q8IWZ6 715 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 GALNT12Q8IXK2 581 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 CHPFQ8IZ52 775 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 FAM169BQ8N8A8 192 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 PNPLA1Q8N8W4 532 aa6.17□□□□□ -1.42
PRKCH-220ENST00000556164 TERB1Q8NA31 727 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms