RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TUBP50607 506 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 GOLGA8FQ08AF8 430 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 GOLGA8DPQ0D2H9 430 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 INCA1Q0VD86 236 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SUZ12Q15022 739 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 CRY1Q16526 586 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 DCAF17Q5H9S7 520 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 EOGTQ5NDL2 527 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 C10orf120Q5SQS8 335 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 C10orf76Q5T2E6 689 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 STPG1Q5TH74 334 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SNX30Q5VWJ9 437 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 KRT39Q6A163 491 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 TPGS1Q6ZTW0 290 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 CLEC20AQ6ZU45 233 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 KIAA1958Q8N8K9 716 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 IL17RCQ8NAC3 791 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 MDGA1Q8NFP4 955 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 HMGB4Q8WW32 186 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SREK1Q8WXA9 508 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 RLN3Q8WXF3 142 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 BHMTQ93088 406 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 OTUB2Q96DC9 234 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 ERLEC1Q96DZ1 483 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 CNOT6LQ96LI5 555 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 HEXIM2Q96MH2 286 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 HNRNPABQ99729 332 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 BBS2Q9BXC9 721 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 TMEM8AQ9HCN3 771 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 CSNK1G1Q9HCP0 422 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SPHK2Q9NRA0 654 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 OSER1Q9NX31 292 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 DEC1Q9P2X7 70 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 NAGPAQ9UK23 515 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 LSM7Q9UK45 103 aaKnown RBP7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SCML2Q9UQR0 700 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 MAP4K5Q9Y4K4 846 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 PCDHGA5Q9Y5G8 931 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 LAMA1P25391 3075 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 PLXND1Q9Y4D7 1925 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 SPEGQ15772 3267 aa7.05□□□□□ -1.28
PSEN1-216ENST00000556066 ASCC3Q8N3C0 2202 aaKnown RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 TNRC6BQ9UPQ9 1833 aaKnown RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 TCRBV21S2A2A0A5A6 115 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 BCLAF3A2AJT9 711 aaKnown RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ESPNB1AK53 854 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 HHLA1C9JL84 531 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 TRIM24O15164 1050 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CETN3O15182 167 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CAPN5O15484 640 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 HOXC11O43248 304 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 STX10O60499 249 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 RARGP13631 454 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 HNRNPLP14866 589 aaKnown RBP eCLIP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 BCKDHBP21953 392 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 GTF2H1P32780 548 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 PRCPP42785 496 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 TNFRSF4P43489 277 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 KIR2DL1P43626 348 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 MXI1P50539 228 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 NFIL3Q16649 462 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 EDRF1Q3B7T1 1238 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ZCWPW2Q504Y3 356 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 PPP1R26Q5T8A7 1209 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 HTR3DQ70Z44 454 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ARMCX6Q7L4S7 300 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 RASSF3Q86WH2 238 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 MIB1Q86YT6 1006 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 FRMD1Q8N878 549 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ZNF513Q8N8E2 541 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 FBXL13Q8NEE6 735 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 WHAMMQ8TF30 809 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 DDX1Q92499 740 aaKnown RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 SEMA4DQ92854 862 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 SPACA7Q96KW9 195 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CDK15Q96Q40 435 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 TSG101Q99816 390 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 EDEM2Q9BV94 578 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 KLF16Q9BXK1 252 aaPredicted RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 DUSP16Q9BY84 665 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 NMUR1Q9HB89 426 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CYLDQ9NQC7 956 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 CISHQ9NSE2 258 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 DNAJC17Q9NVM6 304 aaKnown RBP7.04□□□□□ -1.28
PSEN1-216ENST00000556066 RMND1Q9NWS8 449 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 RAB20Q9NX57 234 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 DNMT3LQ9UJW3 386 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 MAST4O15021 2626 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
PSEN1-216ENST00000556066 ASPMQ8IZT6 3477 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms