RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PRLRP16471 622 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TCP1P17987 556 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CCR1P32246 355 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CETN2P41208 172 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CXCR3P49682 368 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 ATXN1P54253 815 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 AIF1P55008 147 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TBX4P57082 545 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CYP4F8P98187 520 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 ADGRE1Q14246 886 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 BRMS1LQ5PSV4 323 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 ERMARDQ5T6L9 678 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 PAPD7Q5XG87 772 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 FAM131BQ86XD5 332 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TEKT4Q8WW24 435 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 HSPH1Q92598 858 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 KRT35Q92764 455 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 ZMYM5Q9UJ78 669 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 SNX12Q9UMY4 172 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 HBS1LQ9Y450 684 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 CLUHO75153 1309 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SLC12A8A0AV02 714 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 FANCGO15287 622 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 ZRANB2O95218 330 aaKnown RBP eCLIP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 APOEP02649 317 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 KRT1P04264 644 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 RARAP10276 462 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 MBL2P11226 248 aaPredicted RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 HDCP19113 662 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 IL1R2P27930 398 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 CCR2P41597 374 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 MARCKSL1P49006 195 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PEX5P50542 639 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 COG7P83436 770 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 ITIH3Q06033 890 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 MTA1Q13330 715 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 TUBB2AQ13885 445 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PPP2R5DQ14738 602 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 ZC3H12AQ5D1E8 599 aaKnown RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 KCNT1Q5JUK3 1230 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 GPR158Q5T848 1215 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 TXNDC8Q6A555 127 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 CES5AQ6NT32 575 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 EP400NLQ6ZTU2 488 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 GPR149Q86SP6 731 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 CCDC50Q8IVM0 306 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 RCOR2Q8IZ40 523 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 CCDC185Q8N715 623 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 MAB21L3Q8N8X9 362 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 KCTD6Q8NC69 237 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 EXD1Q8NHP7 514 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SHKBP1Q8TBC3 707 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 NTAN1Q96AB6 310 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PBKQ96KB5 322 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 OSBPL9Q96SU4 736 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PSMB7Q99436 277 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 WDR6Q9NNW5 1121 aaKnown RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 CLDND1Q9NY35 253 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.57
TMEM260-208ENST00000555905 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
TMEM260-208ENST00000555905 PRRC2BQ5JSZ5 2229 aaKnown RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 C2orf16Q68DN1 1984 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 CES2O00748 559 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 CKMP06732 381 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 HMBSP08397 361 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 GJA1P17302 382 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 FSHRP23945 695 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 CXCR5P32302 372 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ADRA1BP35368 520 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 HARS2P49590 506 aaKnown RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 NTHL1P78549 312 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 RING1Q06587 406 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SCAPQ12770 1279 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 EIF4EBP2Q13542 120 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 KRT81Q14533 505 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 TEAD2Q15562 447 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 PRSS36Q5K4E3 855 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SEL1L2Q5TEA6 688 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms