RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ABCC13Q9NSE7 274 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 IGHV1OR15-9A0A0B4J2B8 117 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 SLC12A8A0AV02 714 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 C4orf47A7E2U8 309 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 TULP2O00295 520 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 TIMM44O43615 452 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 GNA14O95837 355 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 C7P10643 843 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 CD19P15391 556 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 HARS2P49590 506 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 IRX4P78413 519 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 RPL6Q02878 288 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 CNGA2Q16280 664 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 MEA1Q16626 185 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 N4BP2L1Q5TBK1 243 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 SMYD5Q6GMV2 418 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 KIAA1211LQ6NV74 962 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 MSANTD2Q6P1R3 559 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 ANKS1BQ7Z6G8 1248 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 DENND1CQ8IV53 801 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 SIX6OS1Q8N1H7 587 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 FRMD1Q8N878 549 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 LMO3Q8TAP4 145 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 SLC35F5Q8WV83 523 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 MRGPRX1Q96LB2 322 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 MAN1B1Q9UKM7 699 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 ANGPTL2Q9UKU9 493 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 NFE2L3Q9Y4A8 694 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 ACACBO00763 2458 aa13.28□□□□□ -0.28
HNRNPC-221ENST00000555883 EPG5Q9HCE0 2579 aa13.27□□□□□ -0.28
HNRNPC-221ENST00000555883 TNRC6BQ9UPQ9 1833 aaKnown RBP13.27□□□□□ -0.28
HNRNPC-221ENST00000555883 SDK1Q7Z5N4 2213 aa13.27□□□□□ -0.28
HNRNPC-221ENST00000555883 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 SERPINF2P08697 491 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CEACAM1P13688 526 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 BMP6P22004 513 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 DAOAP59103 153 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 ZNF33AQ06730 810 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 MORC3Q14149 939 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 STARD3Q14849 445 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 GEN1Q17RS7 908 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CCDC40Q4G0X9 1142 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 MPPE1Q53F39 396 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 MPP7Q5T2T1 576 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 TMEM270Q6UE05 265 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 FMNL3Q8IVF7 1028 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 RNF139Q8WU17 664 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 BHMTQ93088 406 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 ZNF419Q96HQ0 510 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 HSFY1Q96LI6 401 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 ELOVL2Q9NXB9 296 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CACNA2D2Q9NY47 1150 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 CNTN6Q9UQ52 1028 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 STON1Q9Y6Q2 735 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 NUP205Q92621 2012 aa13.27□□□□□ -0.29
HNRNPC-221ENST00000555883 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 E7ENQ6 273 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 FBXO21O94952 628 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 IGLV3-19P01714 112 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 HMBSP08397 361 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 ITPKAP23677 461 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 WASP42768 502 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 RPL34P49207 117 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 RING1Q06587 406 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 FUT11Q495W5 492 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 ADGRF1Q5T601 910 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 PSAPL1Q6NUJ1 521 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 THADAQ6YHU6 1953 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 TRIM59Q8IWR1 403 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 ABCA7Q8IZY2 2146 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 TRIML1Q8N9V2 468 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 DDI1Q8WTU0 396 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 NELFBQ8WX92 580 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 FOXJ1Q92949 421 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 CAPN10Q9HC96 672 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms