RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 RXFP3Q9NSD7 469 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 NKX1-2Q9UD57 310 aaPredicted RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ADGRB2O60241 1585 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 PLXNC1O60486 1568 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 TET3O43151 1660 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 ACKR2O00590 384 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 PCDH17O14917 1159 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 KIAA0355O15063 1070 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 NBNO60934 754 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 PMPCBO75439 489 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 TTLL1O95922 423 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 DLDP09622 509 aaKnown RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 ELFN1P0C7U0 828 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 VEGFAP15692 232 aaPredicted RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 CTGFP29279 349 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 CHKAP35790 457 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 HALP42357 657 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 RARRES1P49788 294 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 TPTEP56180 551 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 POLE2P56282 527 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 ZXDAP98168 799 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 MTAPQ13126 283 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 ST3GAL2Q16842 350 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 INO80DQ53TQ3 878 aaPredicted RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 CLEC9AQ6UXN8 241 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 Q6ZWC4 215 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 PARS2Q7L3T8 475 aaKnown RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 TICAM2Q86XR7 235 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 GATAD2AQ86YP4 633 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 RASGRP3Q8IV61 690 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 METTL25Q8N6Q8 603 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 STYXQ8WUJ0 223 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 XAGE5Q8WWM1 108 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 WDYHV1Q96HA8 205 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 PRR25Q96S07 402 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 PRPF18Q99633 342 aaKnown RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 KATNAL1Q9BW62 490 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 FSD1LQ9BXM9 530 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 TP63Q9H3D4 680 aaPredicted RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 DUSP22Q9NRW4 184 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 DACT1Q9NYF0 836 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 DLL3Q9NYJ7 618 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 HS3ST3A1Q9Y663 406 aa3.91□□□□□ -1.78
SRP54-209ENST00000555746 NUP153P49790 1475 aaKnown RBP3.91□□□□□ -1.78
SRP54-209ENST00000555746 CTTNBP2Q8WZ74 1663 aa3.9□□□□□ -1.78
SRP54-209ENST00000555746 EFCAB6Q5THR3 1501 aa3.9□□□□□ -1.78
SRP54-209ENST00000555746 SAMD9Q5K651 1589 aa3.9□□□□□ -1.78
SRP54-209ENST00000555746 CFAP65Q6ZU64 1925 aaKnown RBP3.9□□□□□ -1.78
SRP54-209ENST00000555746 LINC00473A8K010 186 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 GCOM1H8Y6P7 765 aaPredicted RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 SPRY2O43597 315 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 ASNA1O43681 348 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 ORC4O43929 436 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 PIP5K1CO60331 668 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 RHOBTB3O94955 611 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 WDR47O94967 919 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 GCP02774 474 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 ANXA6P08133 673 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 PROZP22891 400 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 EIF4A1P60842 406 aaKnown RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 SIM1P81133 766 aaPredicted RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 ZRSR2Q15696 482 aaKnown RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 ANO1Q5XXA6 986 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 PCSK4Q6UW60 755 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 LRRC71Q8N4P6 559 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.9□□□□□ -1.79
SRP54-209ENST00000555746 ATG16L2Q8NAA4 619 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 SPATA5Q8NB90 893 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 STT3BQ8TCJ2 826 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 GCC1Q96CN9 775 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 GRAMD1AQ96CP6 724 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 PAAF1Q9BRP4 392 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 THAP7Q9BT49 309 aaPredicted RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 DPCDQ9BVM2 203 aaPredicted RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 TMEM120AQ9BXJ8 343 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 MAGEH1Q9H213 219 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 PPCSQ9HAB8 311 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 ENTPD2Q9Y5L3 495 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 COL22A1Q8NFW1 1626 aaPredicted RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 SLIT2O94813 1529 aa3.9□□□□□ -1.79
SRP54-209ENST00000555746 ARHGEF28Q8N1W1 1705 aaKnown RBP3.9□□□□□ -1.79
SRP54-209ENST00000555746 FMN1Q68DA7 1419 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 H0YIZ8 118 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 CYR61O00622 381 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 ZSCAN9O15535 394 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 ITGA2BP08514 1039 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 SRGAP2BP0DMP2 458 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 TMEM225BP0DP42 221 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 MYCLP12524 364 aaPredicted RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 ITPKBP27987 946 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 CYP2C18P33260 490 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 MCM5P33992 734 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 DGKQP52824 942 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 PDE1AP54750 535 aa3.89□□□□□ -1.79
SRP54-209ENST00000555746 ALDH18A1P54886 795 aaKnown RBP3.89□□□□□ -1.79
SRP54-209ENST00000555746 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms