RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 E7ENQ6 273 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 GADD45BO75293 160 aaPredicted RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 NDUFS2O75306 463 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 AFPP02771 609 aaKnown RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 KRT5P13647 590 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 BRD2P25440 801 aaKnown RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 ATXN3P54252 364 aaPredicted RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 MFAP3P55082 362 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 ZNF445P59923 1031 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 TRIP4Q15650 581 aaPredicted RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 MPPE1Q53F39 396 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 TRIM61Q5EBN2 209 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 FYB2Q5VWT5 728 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 FRMD1Q8N878 549 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 TRIML1Q8N9V2 468 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 TFAP2BQ92481 460 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 SLC2A11Q9BYW1 496 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 CIPCQ9C0C6 399 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 SFMBT1Q9UHJ3 866 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
SNX6-205ENST00000555648 FBXO10Q9UK96 956 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 CYP8B1Q9UNU6 501 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNX6-205ENST00000555648 STON1Q9Y6Q2 735 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 LNP1A1A4G5 178 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 PIK3R2O00459 728 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 TIMM44O43615 452 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 TSPAN3O60637 253 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 FBXO21O94952 628 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 CFIP05156 583 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 NDUFV2P19404 249 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 PTGER3P43115 390 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 DAOAP59103 153 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 GCNT1Q02742 428 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 EIF4HQ15056 248 aaKnown RBP16.11■□□□□ 0.17
SNX6-205ENST00000555648 RABEPKQ7Z6M1 372 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 TRIM59Q8IWR1 403 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 SCML4Q8N228 414 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 DEFB119Q8N690 84 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 UBR7Q8N806 425 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 IRGQQ8WZA9 623 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 KAT5Q92993 513 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 TMA16Q96EY4 203 aaKnown RBP16.11■□□□□ 0.17
SNX6-205ENST00000555648 HSFY1Q96LI6 401 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
SNX6-205ENST00000555648 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 HCN2Q9UL51 889 aa16.11■□□□□ 0.17
SNX6-205ENST00000555648 PATE3B3GLJ2 98 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 SART1O43290 800 aaKnown RBP16.1■□□□□ 0.17
SNX6-205ENST00000555648 MED7O43513 233 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 LATS1O95835 1130 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 BMP6P22004 513 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 HOXD12P35452 270 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 SLC11A2P49281 568 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 ZNF132P52740 706 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 UBE2HP62256 183 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 IRX4P78413 519 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 TPD52L1Q16890 204 aaPredicted RBP16.1■□□□□ 0.17
SNX6-205ENST00000555648 GEN1Q17RS7 908 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 PMF1Q6P1K2 205 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 UNC45BQ8IWX7 931 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 RGL4Q8IZJ4 473 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 CEP76Q8TAP6 659 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 SLC35F5Q8WV83 523 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 MIS12Q9H081 205 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 INTS2Q9H0H0 1204 aaKnown RBP16.1■□□□□ 0.17
SNX6-205ENST00000555648 ELOVL2Q9NXB9 296 aa16.1■□□□□ 0.17
SNX6-205ENST00000555648 EVLQ9UI08 416 aaPredicted RBP16.1■□□□□ 0.17
SNX6-205ENST00000555648 MYH10P35580 1976 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 CACNA1AO00555 2505 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 IGHV1OR15-9A0A0B4J2B8 117 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 TYW5A2RUC4 315 aaKnown RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 WASH3PC4AMC7 463 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 MSI1O43347 362 aaKnown RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 LTFP02788 710 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 NOVA1P51513 510 aaKnown RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 ZNF33AQ06730 810 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 CAMK4Q16566 473 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 DUOXA1Q1HG43 343 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 SYCP2LQ5T4T6 812 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 ADGRF1Q5T601 910 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 SERPINA13PQ6UXR4 307 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 BHLHA9Q7RTU4 235 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 CCDC117Q8IWD4 279 aaPredicted RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 LMO3Q8TAP4 145 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 MRGPRX1Q96LB2 322 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 DDX50Q9BQ39 737 aaKnown RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms