RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ATP5C1P36542 298 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 SLC25A11Q02978 314 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 CCDC85BQ15834 202 aaPredicted RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 HECTD3Q5T447 861 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 FAM72AQ5TYM5 149 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 FAM72DQ6L9T8 149 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 CCDC70Q6NSX1 233 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 CCDC149Q6ZUS6 474 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 FAM72BQ86X60 149 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 FNIP1Q8TF40 1166 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 HDAC7Q8WUI4 952 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 CELF6Q96J87 481 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 GCNAQ96QF7 691 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 L2HGDHQ9H9P8 463 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 ANLNQ9NQW6 1124 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 MPP6Q9NZW5 540 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 GOLGA6L7A0A1B0GV03 622 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 ZSCAN5CA6NGD5 496 aaPredicted RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 ADRA1BP35368 520 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■■□□□ 14.1
NEK9-205ENST00000555405 RAB30Q15771 203 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 RARS2Q5T160 578 aaKnown RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 RAP1GAP2Q684P5 730 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 RFWD3Q6PCD5 774 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 CIR1Q86X95 450 aaPredicted RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 ASAH2Q9NR71 780 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 EYSQ5T1H1 3165 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 EEF2KO00418 725 aaKnown RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 APOEP02649 317 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 CCR1P32246 355 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 NRLP54845 237 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 TPI1P60174 286 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 MTM1Q13496 603 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 PPP1R7Q15435 360 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 BHLHA9Q7RTU4 235 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 CHSY1Q86X52 802 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 DENND1CQ8IV53 801 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 CFAP52Q8N1V2 620 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 KCTD15Q96SI1 283 aaPredicted RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 RNF38Q9H0F5 515 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 DDX56Q9NY93 547 aaKnown RBP10.58□□□□□ -0.72
NEK9-205ENST00000555405 OR12D3Q9UGF7 316 aa10.58□□□□□ -0.72
NEK9-205ENST00000555405 H3BNC9 293 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 RB1P06400 928 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 GLI1P08151 1106 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 HMGA1P17096 107 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 PTPN9P43378 593 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ERVK-21P61565 698 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 TFDP3Q5H9I0 405 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 PDZD4Q76G19 769 aaPredicted RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 ITIH5Q86UX2 942 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 GSPT2Q8IYD1 628 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 EXD1Q8NHP7 514 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 C2orf15Q8WU43 125 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 DEPDC1BQ8WUY9 529 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 SMG7Q92540 1137 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 NAP1L3Q99457 506 aaPredicted RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 TRIM51Q9BSJ1 452 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 CEP41Q9BYV8 373 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ETNK2Q9NVF9 386 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 PLK2Q9NYY3 685 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ZNF840PA6NDX5 716 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 TTI1O43156 1089 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 CLASP2O75122 1294 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 PAGE1O75459 146 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 PCK1P35558 622 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 GUCY2DQ02846 1103 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 LEKR1Q6ZMV7 388 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 DDX42Q86XP3 938 aaKnown RBP eCLIP10.57□□□□□ -0.72
NEK9-205ENST00000555405 KATNAL2Q8IYT4 538 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ZDHHC14Q8IZN3 488 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 MYRIPQ8NFW9 859 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 FCRL2Q96LA5 508 aaPredicted RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 SLC2A13Q96QE2 648 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 UBXN6Q9BZV1 441 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ZNF576Q9H609 170 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 PNPLA8Q9NP80 782 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.57□□□□□ -0.72
NEK9-205ENST00000555405 FNIP2Q9P278 1114 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 F5P12259 2224 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 COCHO43405 550 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 LILRB3O75022 631 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 TJP3O95049 919 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 F9P00740 461 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 GPR158Q5T848 1215 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 STRADAQ7RTN6 431 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ARHGAP18Q8N392 663 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 ACTL9Q8TC94 416 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 IRGQQ8WZA9 623 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 RPRD1AQ96P16 312 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms