RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 A0A1B0GVT2 93 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 CER1O95813 267 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 RALAP11233 206 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 ACADMP11310 421 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 HLA-EP13747 358 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 CD58P19256 250 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 OXTRP30559 389 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 STK4Q13043 487 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 ENPP2Q13822 863 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 C1orf220Q5T0J3 134 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 TMPRSS7Q7RTY8 843 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 DENND1CQ8IV53 801 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 KIAA0895Q8NCT3 520 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 GOLGA5Q8TBA6 731 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 BAHD1Q8TBE0 780 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 SNX19Q92543 992 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 TAF4BQ92750 862 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 PIWIL1Q96J94 861 aaKnown RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 CIPCQ9C0C6 399 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 APOBEC3GQ9HC16 384 aaKnown RBP13.77□□□□□ -0.21
XRCC3-212ENST00000555231 ELOVL2Q9NXB9 296 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 BTBD3Q9Y2F9 522 aa13.77□□□□□ -0.21
XRCC3-212ENST00000555231 KLRC4O43908 158 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 YEATS4O95619 227 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 NR3C1P04150 777 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 EPHX1P07099 455 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 CHKAP35790 457 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 CSNK1EP49674 416 aaKnown RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 ZNF394Q53GI3 561 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 PPP1R26Q5T8A7 1209 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 CCDC186Q7Z3E2 898 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 ANKS1BQ7Z6G8 1248 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 TADA2BQ86TJ2 420 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 INTS4Q96HW7 963 aaKnown RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 LRIG1Q96JA1 1093 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 NUP58Q9BVL2 599 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 DCLK3Q9C098 648 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 C6orf106Q9H6K1 298 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
XRCC3-212ENST00000555231 ZNF510Q9Y2H8 683 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 NFE2L3Q9Y4A8 694 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
XRCC3-212ENST00000555231 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
XRCC3-212ENST00000555231 SLC12A8A0AV02 714 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 KCNK3O14649 394 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 NPC1O15118 1278 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 CYBBP04839 570 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 PSEN1P49768 467 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 ZNF132P52740 706 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 COG7P83436 770 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 CYP4F3Q08477 520 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 CCDC157Q569K6 752 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 LAYNQ6UX15 382 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 SERPINA13PQ6UXR4 307 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 ZNF366Q8N895 744 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
XRCC3-212ENST00000555231 C1orf216Q8TAB5 229 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 DUSP16Q9BY84 665 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 KCTD10Q9H3F6 313 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 CLIC5Q9NZA1 410 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
XRCC3-212ENST00000555231 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 TRABD2BA6NFA1 517 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 FLRT2O43155 660 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 TSPAN3O60637 253 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 ACSL1P33121 698 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 GCLMP48507 274 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 ARID5AQ03989 594 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 KIF19Q2TAC6 998 aa13.74□□□□□ -0.21
XRCC3-212ENST00000555231 KMT5BQ4FZB7 885 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms