RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SLC44A3Q8N4M1 653 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 KIF18AQ8NI77 898 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 RSAD2Q8WXG1 361 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 RFFLQ8WZ73 363 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 IRF7Q92985 503 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 SELENOOQ9BVL4 669 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 GOLPH3Q9H4A6 298 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 RRN3Q9NYV6 651 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 CNOT8Q9UFF9 292 aaKnown RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 MUTYHQ9UIF7 546 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 NUDT5Q9UKK9 219 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 DUSP12Q9UNI6 340 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 HBS1LQ9Y450 684 aaKnown RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 DOCK6Q96HP0 2047 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 SLC12A8A0AV02 714 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 TNFRSF10AO00220 468 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ENC1O14682 589 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 MDM4O15151 490 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 CHADO15335 359 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 DCXO43602 365 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 GRAP2O75791 330 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ALADP13716 330 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 GDI1P31150 447 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 GBP1P32455 592 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 PLA2G5P39877 138 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 MATKP42679 507 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 HARS2P49590 506 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 RNASE9P60153 205 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 NNTQ13423 1086 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 MAMLD1Q13495 774 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 MEI1Q5TIA1 1274 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 NUGGCQ68CJ6 796 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 POTEHQ6S545 545 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 TXLNBQ8N3L3 684 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 C3orf20Q8ND61 904 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 TRIM58Q8NG06 486 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 CSGALNACT1Q8TDX6 532 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 DQX1Q8TE96 717 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 CTNNBL1Q8WYA6 563 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 KHSRPQ92945 711 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ATP2A3Q93084 1043 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 RSPRY1Q96DX4 576 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 SLC2A13Q96QE2 648 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 TRIM7Q9C029 511 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 DCLK3Q9C098 648 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 METTL5Q9NRN9 209 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 NAALADL1Q9UQQ1 740 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 ZNF510Q9Y2H8 683 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 SCINQ9Y6U3 715 aa11.36□□□□□ -0.59
SHMT2-218ENST00000555213 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
SHMT2-218ENST00000555213 REV3LO60673 3130 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 MSI1O43347 362 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 GJB6O95452 261 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NFATC1O95644 943 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 APOEP02649 317 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 SLC2A3P11169 496 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 KRT3P12035 628 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 PRLRP16471 622 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 SDC4P31431 198 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NOS2P35228 1153 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 MTA1Q13330 715 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 TAF5Q15542 800 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 TRIP4Q15650 581 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 DNTTIP2Q5QJE6 756 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 DCUN1D2Q6PH85 259 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 SND1Q7KZF4 910 aaKnown RBP eCLIP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 ARCQ7LC44 396 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 UNC45BQ8IWX7 931 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 RHOT2Q8IXI1 618 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 CPA6Q8N4T0 437 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 OSCP1Q8WVF1 389 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NAPGQ99747 312 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 CD320Q9NPF0 282 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms