RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 HSPA12BQ96MM6 686 aa16.45■□□□□ 0.22
ARHGEF40-205ENST00000555052 THAP10Q9P2Z0 257 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-205ENST00000555052 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-205ENST00000555052 STON1Q9Y6Q2 735 aa16.45■□□□□ 0.22
ARHGEF40-205ENST00000555052 NPC1O15118 1278 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 ZBTB24O43167 697 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 STX10O60499 249 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 SPINK2P20155 84 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 GFPT1Q06210 699 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 FUT11Q495W5 492 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 PM20D1Q6GTS8 502 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 FAM217AQ8IXS0 508 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 ARHGAP18Q8N392 663 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 CPXM2Q8N436 756 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 ANKRD52Q8NB46 1076 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 PIWIL1Q96J94 861 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 SLC32A1Q9H598 525 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 MARCH2Q9P0N8 246 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 USP36Q9P275 1121 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 LOC400499M0QZD8 3231 aa16.44■□□□□ 0.22
ARHGEF40-205ENST00000555052 BAHCC1Q9P281 2608 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 TULP2O00295 520 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 ARHGAP33O14559 1287 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 CETN3O15182 167 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 HMBSP08397 361 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 IL12RB1P42701 662 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 YWHAGP61981 247 aaKnown RBP eCLIP16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 DENND1CQ8IV53 801 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 MINDY1Q8N5J2 469 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 KDF1Q8NAX2 398 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 GATA6Q92908 595 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 SCNM1Q9BWG6 230 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 GTPBP2Q9BX10 602 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 MKRN2Q9H000 416 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 STRIP2Q9ULQ0 834 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 CLEC4EQ9ULY5 219 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
ARHGEF40-205ENST00000555052 IGSF10Q6WRI0 2623 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 SLC12A8A0AV02 714 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 SLC16A3O15427 465 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 GJB3O75712 270 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 ZBED1O96006 694 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 TKTL1P51854 596 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 ZNF132P52740 706 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 ATXN3P54252 364 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 PNOCQ13519 176 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 STARD3Q14849 445 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 TRIP4Q15650 581 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 KIAA1324Q6UXG2 1013 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 ANKS1BQ7Z6G8 1248 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 UBR7Q8N806 425 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 OR2I1PQ8NGU4 316 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 FOXJ1Q92949 421 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 PLD4Q96BZ4 506 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 ULBP1Q9BZM6 244 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 DNAAF2Q9NVR5 837 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 WSB2Q9NYS7 404 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 TSPAN16Q9UKR8 245 aa16.42■□□□□ 0.22
ARHGEF40-205ENST00000555052 SMG1Q96Q15 3661 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 SPAARA0A1B0GVQ0 90 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 XPO1O14980 1071 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 OPHN1O60890 802 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 CD59P13987 128 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 CD6P30203 668 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 PRCPP42785 496 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 BCAT1P54687 386 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 SLC8A3P57103 927 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 PDE4CQ08493 712 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 CUL2Q13617 745 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 SLC2A11Q9BYW1 496 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 PRDM16Q9HAZ2 1276 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 NFE2L3Q9Y4A8 694 aa16.41■□□□□ 0.22
ARHGEF40-205ENST00000555052 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 NDUFS2O75306 463 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 IGLV3-19P01714 112 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 CYBBP04839 570 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 SYPP08247 313 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 HOXD9P28356 352 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 COPAP53621 1224 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 PMS1P54277 932 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 FAM193AP78312 1265 aa16.4■□□□□ 0.22
ARHGEF40-205ENST00000555052 SIM1P81133 766 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms