RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CNOT1A5YKK6 2376 aaKnown RBP11.06□□□□□ -0.64
TMEM260-206ENST00000555046 KANSL1LA0AUZ9 987 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 ARNTLO00327 626 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CYBBP04839 570 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 UNGP13051 313 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CHRNB2P17787 502 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 NOS2P35228 1153 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 MAGEA9P43362 315 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 PGFP49763 221 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 NOMO3P69849 1222 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 GAD2Q05329 585 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 RING1Q06587 406 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 TRIP4Q15650 581 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CLEC16AQ2KHT3 1053 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 EML3Q32P44 896 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 ACAD10Q6JQN1 1059 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 BHLHA9Q7RTU4 235 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 PHF13Q86YI8 300 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 FAM3CQ92520 227 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 NDRG1Q92597 394 aaKnown RBP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 TRIM11Q96F44 468 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 RBSNQ9H1K0 784 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 LINC00597Q9H2U6 94 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 HAUS4Q9H6D7 363 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 HEBP1Q9NRV9 189 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CYTH4Q9UIA0 394 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 NUDT5Q9UKK9 219 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 CA14Q9ULX7 337 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 TLR6Q9Y2C9 796 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 SIT1Q9Y3P8 196 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
TMEM260-206ENST00000555046 LOC400499M0QZD8 3231 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 STC2O76061 302 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 ERBB2P04626 1255 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 IRF1P10914 325 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 CASP14P31944 242 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 MATKP42679 507 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 TBX4P57082 545 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 ZXDBP98169 803 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 CENPCQ03188 943 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 E2F5Q15329 346 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 DHCR24Q15392 516 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 PTPN20Q4JDL3 420 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 ASTLQ6HA08 431 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 OLFML1Q6UWY5 402 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 TPRG1Q6ZUI0 275 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SYNPOQ8N3V7 929 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SLC20A1Q8WUM9 679 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 RNF34Q969K3 372 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 ZFYVE19Q96K21 471 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SLC2A13Q96QE2 648 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 XPO6Q96QU8 1125 aaKnown RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 DDX23Q9BUQ8 820 aaKnown RBP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM260-206ENST00000555046 GTSE1Q9NYZ3 720 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 SFMBT1Q9UHJ3 866 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 NAALADL1Q9UQQ1 740 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 WNT6Q9Y6F9 365 aa11.04□□□□□ -0.64
TMEM260-206ENST00000555046 DSPP15924 2871 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 FAM170BA6NMN3 283 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 SPECC1L-ADORA2AF8WAN1 911 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 IRAK2O43187 625 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 TRUB2O95900 331 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 APOEP02649 317 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 GYPCP04921 128 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 ADRB1P08588 477 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 MYBL1P10243 752 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 KRT3P12035 628 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 ABCB4P21439 1286 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 DRD1P21728 446 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 CORO1AP31146 461 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 CCR1P32246 355 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 EIF2DP41214 584 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 RNASE9P60153 205 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 LRRC32Q14392 662 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 FBXO43Q4G163 708 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 TDRD12Q587J7 1177 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 DGKKQ5KSL6 1271 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 ADGRF1Q5T601 910 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 FAM102AQ5T9C2 384 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 MMS22LQ6ZRQ5 1243 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 FAM183BPQ6ZVS7 135 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 XYLT1Q86Y38 959 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms