RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PRR16	Q569H4	304 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	KIAA0895L	Q68EN5	471 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	PEG10	Q86TG7	708 aa	Known RBP	6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	SIMC1	Q8NDZ2	872 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	COL1A1	P02452	1464 aa	Predicted RBP	6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	HTT	P42858	3142 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	SPEF2	Q9C093	1822 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	PDE4DIP	Q5VU43	2346 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	CCL15-CCL14	A0A0B4J2E2	113 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	BTBD19	C9JJ37	291 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	PDE8B	O95263	885 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	PDHA1	P08559	390 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	CD6	P30203	668 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	MAPK10	P53779	464 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	SP3	Q02447	781 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	CCL15	Q16663	113 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	TMEM108	Q6UXF1	575 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	MROH5	Q6ZUA9	1318 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	ATG9A	Q7Z3C6	839 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	DGKH	Q86XP1	1220 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	PDLIM2	Q96JY6	352 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	HEPH	Q9BQS7	1158 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	ACTRT3	Q9BYD9	372 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	TPSD1	Q9BZJ3	242 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	RIOX1	Q9H6W3	641 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	MED16	Q9Y2X0	877 aa		6.12	□□□□□ -1.43
PSMC6-208	ENST00000554956	ADGRA2	Q96PE1	1338 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956		A0A1W2PPL8	197 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZAR1L	A6NP61	321 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	VSTM5	A8MXK1	200 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	MPPED1	O15442	326 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	TRIAP1	O43715	76 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	KRT18	P05783	430 aa	Known RBP	6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	ELFN1	P0C7U0	828 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	UCP3	P55916	312 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	LILRA4	P59901	499 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	NANOS3	P60323	173 aa	Known RBP	6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	LONRF3	Q496Y0	759 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	KAZN	Q674X7	775 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	C14orf80	Q86SX3	495 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	SLC9A6	Q92581	669 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	TEKT1	Q969V4	418 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	ERO1A	Q96HE7	468 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF333	Q96JL9	665 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	OSBPL9	Q96SU4	736 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	SPATA5L1	Q9BVQ7	753 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	TRIM54	Q9BYV2	358 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	AMBRA1	Q9C0C7	1298 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF700	Q9H0M5	742 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	TMEM60	Q9H2L4	133 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	IL17RB	Q9NRM6	502 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	PIH1D1	Q9NWS0	290 aa	Known RBP	6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	TLK1	Q9UKI8	766 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	PLEKHM1	Q9Y4G2	1056 aa		6.11	□□□□□ -1.43
PSMC6-208	ENST00000554956	MKI67	P46013	3256 aa	Known RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	EYA2	O00167	538 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	TPD52L2	O43399	206 aa	Known RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ADORA1	P30542	326 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	SLC11A2	P49281	568 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	RARRES1	P49788	294 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	TCP10	Q12799	353 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	EIF2B5	Q13144	721 aa	Known RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	TNFAIP1	Q13829	316 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	GBX1	Q14549	363 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	GRM3	Q14832	879 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ERCC6L	Q2NKX8	1250 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF362	Q5T0B9	420 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	CDC42EP5	Q6NZY7	148 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	KIAA0319L	Q8IZA0	1049 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	FAM109A	Q8N4B1	249 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	PGBD1	Q96JS3	809 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	SIL1	Q9H173	461 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ARNT2	Q9HBZ2	717 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	KIAA1586	Q9HCI6	787 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	SERHL	Q9NQF3	203 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	C1orf112	Q9NSG2	853 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	DKK3	Q9UBP4	350 aa		6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	PA2G4	Q9UQ80	394 aa	Known RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMC6-208	ENST00000554956	MYH3	P11055	1940 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	AKAP11	Q9UKA4	1901 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	LOC102724159	A0A0B4J2E5	919 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	WDR27	A2RRH5	827 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	CAPN8	A6NHC0	703 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	FAM227A	F5H4B4	570 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	PPM1D	O15297	605 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	PHGDH	O43175	533 aa	Known RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	TLR2	O60603	784 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	PEX14	O75381	377 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	FRAT2	O75474	233 aa	Predicted RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	SOAT2	O75908	522 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	MYL1	P05976	194 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	ARFIP2	P53365	341 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	SP2	Q02086	613 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	ITIH3	Q06033	890 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	PTPRR	Q15256	657 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	PWP2	Q15269	919 aa	Known RBP	6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms