RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GOLGA1Q92805 767 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 CD101Q93033 1021 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 NELL2Q99435 816 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 CHRDQ9H2X0 955 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 POPDC2Q9HBU9 364 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 HBS1LQ9Y450 684 aaKnown RBP12.88□□□□□ -0.35
SYNE2-214ENST00000554928 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
SYNE2-214ENST00000554928 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 MUC6Q6W4X9 2439 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 K7EQS6 105 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 GFRA2O00451 464 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 IRAK2O43187 625 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 TSPAN3O60637 253 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 TULP3O75386 442 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 DAB1O75553 588 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 ADH1CP00326 375 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 GYPCP04921 128 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 FERP16591 822 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 MMP8P22894 467 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SLC6A4P31645 630 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 FLT3P36888 993 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 RPS9P46781 194 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 TBX4P57082 545 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 RNASE9P60153 205 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 GAD2Q05329 585 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 NR1H3Q13133 447 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 EIF4EBP2Q13542 120 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 ASIC2Q16515 512 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 RAB6CQ53S08 254 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 DCAF6Q58WW2 860 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 ZC3H12AQ5D1E8 599 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SLC26A9Q7LBE3 791 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 ZNF571Q7Z3V5 609 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 OTUB2Q96DC9 234 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 C18orf8Q96DM3 657 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 RAB6CQ9H0N0 254 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SEPT11Q9NVA2 429 aaKnown RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-214ENST00000554928 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 HCN2Q9UL51 889 aa12.87□□□□□ -0.35
SYNE2-214ENST00000554928 CAPN9O14815 690 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 HSF2BPO75031 334 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 RNF40O75150 1001 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 TYRP14679 529 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 SEC13P55735 322 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 SATB1Q01826 763 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 ANGPT1Q15389 498 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 SFMBT2Q5VUG0 894 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 FAM217AQ8IXS0 508 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 EMC1Q8N766 993 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 ZNF397Q8NF99 534 aaPredicted RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 BBS2Q9BXC9 721 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 DCLK3Q9C098 648 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 NUCKS1Q9H1E3 243 aaKnown RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 ANLNQ9NQW6 1124 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
SYNE2-214ENST00000554928 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 TMEM59LQ9UK28 342 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
SYNE2-214ENST00000554928 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 GLI1P08151 1106 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-214ENST00000554928 CISD3P0C7P0 127 aa12.85□□□□□ -0.35
SYNE2-214ENST00000554928 GGCXP38435 758 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms