RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 FAM221BA6H8Z2 402 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 CYBBP04839 570 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 NCAM1P13591 858 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 CMA1P23946 247 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
RDH11-207ENST00000554731 IL12RB1P42701 662 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 ENPEPQ07075 957 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 GRIK2Q13002 908 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 ENPP2Q13822 863 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 NFIL3Q16649 462 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
RDH11-207ENST00000554731 ANKS1BQ7Z6G8 1248 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 NAXDQ8IW45 347 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 CADM4Q8NFZ8 388 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 DNASE2BQ8WZ79 361 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 SIPA1Q96FS4 1042 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 P2RY11Q96G91 374 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 ITM2CQ9NQX7 267 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
RDH11-207ENST00000554731 RHOBTB3O94955 611 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 OXTRP30559 389 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 PSMC2P35998 433 aaKnown RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 TPMTP51580 245 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 PKP1Q13835 747 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 EIF4HQ15056 248 aaKnown RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 ELOVL2Q9NXB9 296 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 AGO1Q9UL18 857 aaKnown RBP13.08□□□□□ -0.32
RDH11-207ENST00000554731 KNL1Q8NG31 2342 aa13.08□□□□□ -0.32
RDH11-207ENST00000554731 SLC12A8A0AV02 714 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 KCNJ18B7U540 433 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 TIMM44O43615 452 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 ACADMP11310 421 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 GTF2H1P32780 548 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 SYKP43405 635 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 SLC8A3P57103 927 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
RDH11-207ENST00000554731 ARID5AQ03989 594 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 ADAM9Q13443 819 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 ZNF234Q14588 700 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 DCAF12L1Q5VU92 463 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 KRT39Q6A163 491 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
RDH11-207ENST00000554731 DDI1Q8WTU0 396 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 ADAMTS14Q8WXS8 1223 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 SLC2A11Q9BYW1 496 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 UBXN6Q9BZV1 441 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 CIPCQ9C0C6 399 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
RDH11-207ENST00000554731 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
RDH11-207ENST00000554731 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
RDH11-207ENST00000554731 BAHCC1Q9P281 2608 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 BCAT2O15382 392 aaPredicted RBP13.06□□□□□ -0.32
RDH11-207ENST00000554731 CER1O95813 267 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 EPHX1P07099 455 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 MXI1P50539 228 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 RAD23BP54727 409 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 RING1Q06587 406 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 IL27RAQ6UWB1 636 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 SERPINA13PQ6UXR4 307 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 FBXL13Q8NEE6 735 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 CLEC4EQ9ULY5 219 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
RDH11-207ENST00000554731 FASNP49327 2511 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms