RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 AKAP8O43823 692 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 CCNT1O60563 726 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 RPS6KA5O75582 802 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 HNRNPLP14866 589 aaKnown RBP eCLIP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 DARSP14868 501 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 CTNNB1P35222 781 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 QARSP47897 775 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 BPIFB4P59827 614 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 PSMC5P62195 406 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 ADCY2Q08462 1091 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 PCBP1Q15365 356 aaKnown RBP eCLIP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 EPHA7Q15375 998 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 XKR3Q5GH77 459 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 UNQ6494/PRO21346Q6UXR6 183 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 ANO5Q75V66 913 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 TRMT1LQ7Z2T5 733 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 Q8N1X5 172 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 SYNPOQ8N3V7 929 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 D2HGDHQ8N465 521 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 METTL13Q8N6R0 699 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 ATXN2LQ8WWM7 1075 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF668Q96K58 619 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 MTMR9Q96QG7 549 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 MAP7D2Q96T17 732 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 NAP1L4Q99733 375 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 SH2D3AQ9BRG2 576 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 LLPHQ9BRT6 129 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 LXNQ9BS40 222 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 TARS2Q9BW92 718 aaKnown RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 CSRNP2Q9H175 543 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM60Q9H2L4 133 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 SEMA4AQ9H3S1 761 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 MTG2Q9H4K7 406 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 RGS18Q9NS28 235 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 C1orf112Q9NSG2 853 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 NRBP2Q9NSY0 501 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 POLR3BQ9NW08 1133 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-203ENST00000554636 NCDNQ9UBB6 729 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 ST3GAL5Q9UNP4 418 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 GINS2Q9Y248 185 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 SPO11Q9Y5K1 396 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 PLXNA4Q9HCM2 1894 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 C2orf78A6NCI8 922 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 GRM6O15303 877 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 NEMFO60524 1076 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 MAFO75444 373 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 PRPF6O94906 941 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 RB1P06400 928 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 STAG3L1P0CL83 205 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ATF7P17544 494 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 FGFR4P22455 802 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 TMOD1P28289 359 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 BMPR1AP36894 532 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 NPEPPSP55786 919 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 NLRP11P59045 1033 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 FAM189BP81408 668 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 MRPS5P82675 430 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 HMGN5P82970 282 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 DGCR2P98153 550 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 TFF2Q03403 129 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 GPM6BQ13491 265 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 BTG3Q14201 252 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 CTTNQ14247 550 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 RABEP1Q15276 862 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 SEPT7Q16181 437 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 CALCRLQ16602 461 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ODR4Q5SWX8 454 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 NCAPH2Q6IBW4 605 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 TIGD7Q6NT04 549 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 CRIP3Q6Q6R5 217 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 FAM43BQ6ZT52 329 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF410Q86VK4 478 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 PHYKPLQ8IUZ5 450 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 C4orf19Q8IY42 314 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 NINJ1Q92982 152 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 GFM2Q969S9 779 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 SLC7A6OSQ96CW6 309 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 MRPL38Q96DV4 380 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 C8orf76Q96K31 380 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ZSCAN31Q96LW9 406 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 WDR92Q96MX6 357 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ASB2Q96Q27 587 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ADAM2Q99965 735 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 EIF2AK1Q9BQI3 630 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 LMAN2LQ9H0V9 348 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 MS4A5Q9H3V2 200 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 DHX33Q9H6R0 707 aaKnown RBP4.61□□□□□ -1.67
VTI1B-203ENST00000554636 ZMAT4Q9H898 229 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 RGL1Q9NZL6 768 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 KCMF1Q9P0J7 381 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 VWA7Q9Y334 891 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 TESMINQ9Y4I5 508 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 HS3ST3A1Q9Y663 406 aa4.61□□□□□ -1.67
VTI1B-203ENST00000554636 A0A087WZ62 844 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 DENND3A2RUS2 1198 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TBKBP1A7MCY6 615 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 DKC1O60832 514 aaKnown RBP eCLIP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CSDE1O75534 798 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms