RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CLCN1P35523 988 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 WASP42768 502 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 DGKGP49619 791 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 DGKEP52429 567 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 TBX4P57082 545 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 TRIP4Q15650 581 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 ANO6Q4KMQ2 910 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 EOGTQ5NDL2 527 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 OR6B2Q6IFH4 312 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 MSANTD2Q6P1R3 559 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 WDR5BQ86VZ2 330 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 ZNF513Q8N8E2 541 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 SUMF1Q8NBK3 374 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 RUBCNQ92622 972 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 EPC1Q9H2F5 836 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 PLCB1Q9NQ66 1216 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 BCCIPQ9P287 314 aaKnown RBP eCLIP11.12□□□□□ -0.63
SHMT2-213ENST00000554600 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 GMEB2Q9UKD1 530 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 MMP17Q9ULZ9 603 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 NAALADL1Q9UQQ1 740 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 CKAP5Q14008 2032 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 SGK1O00141 431 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 PAPSS1O43252 624 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 HRO43593 1189 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 RPP40O75818 363 aaKnown RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 MOCS2O96007 188 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 HOXA6P31267 233 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 CNR2P34972 360 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 KLK7P49862 253 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 SNX16P57768 344 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 UBXN1Q04323 297 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 SDE2Q6IQ49 451 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 UNC45BQ8IWX7 931 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 PGBD3Q8N328 593 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 CPXM2Q8N436 756 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 DCLK2Q8N568 766 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 IL17RCQ8NAC3 791 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 DQX1Q8TE96 717 aaKnown RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 STK32AQ8WU08 396 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 SERPINB11Q96P15 392 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 CPXM1Q96SM3 734 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 TPSD1Q9BZJ3 242 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 POLMQ9NP87 494 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-213ENST00000554600 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 PCDHGC3Q9UN70 934 aa11.11□□□□□ -0.63
SHMT2-213ENST00000554600 NYNRINQ9P2P1 1898 aaKnown RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 SYNJ2BP-COX16A0A087WUM0 186 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 A0A0A0MRY4 1105 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 GRAP2O75791 330 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 GFPT2O94808 682 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 APOEP02649 317 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 CYP11B1P15538 503 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 KIR2DL1P43626 348 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 RPL34P49207 117 aaKnown RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 SLC11A2P49281 568 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 SYCP1Q15431 976 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 CRY1Q16526 586 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 MPPE1Q53F39 396 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 DCAF6Q58WW2 860 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 ADGRF1Q5T601 910 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 SYPL2Q5VXT5 272 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 EGFLAMQ63HQ2 1017 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 NUGGCQ68CJ6 796 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 LAIR1Q6GTX8 287 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 DPY19L2P1Q6NXN4 242 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 ERMP1Q7Z2K6 904 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 TRMT11Q7Z4G4 463 aaKnown RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 TMEM110Q86TL2 294 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 KIAA2013Q8IYS2 634 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 CHPFQ8IZ52 775 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 TMEM35BQ8NCS4 154 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 UCMAQ8WVF2 138 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 GAB3Q8WWW8 586 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 RNF34Q969K3 372 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms