RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 TRMT1LQ7Z2T5 733 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CCDC60Q8IWA6 550 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CMIPQ8IY22 773 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 SMAP1Q8IYB5 467 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CBARPQ8N350 705 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 LINC01465Q8N7H1 131 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 DTX3Q8N9I9 347 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF610Q8N9Z0 462 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZCCHC14Q8WYQ9 949 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 SMG7Q92540 1137 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 PHKBQ93100 1093 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CLDN23Q96B33 292 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF707Q96C28 371 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 PGBD4Q96DM1 585 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 AHCYL2Q96HN2 611 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZSWIM3Q96MP5 696 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 TMEM175Q9BSA9 504 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 MENTQ9BUN1 341 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 VN1R3Q9BXE9 311 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 GCOM2Q9BZD3 368 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 NT5C3AQ9H0P0 336 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 LY9Q9HBG7 655 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 TOPORSQ9NS56 1045 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 TBC1D22BQ9NU19 505 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZDHHC7Q9NXF8 308 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 RAB23Q9ULC3 237 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 E7EWF7 191 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 NRP1O14786 923 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 TEX28O15482 410 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LRP3O75074 770 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 DDHD2O94830 711 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 PLEKHA8P1O95397 391 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RETP07949 1114 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MMEP08473 750 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 CYP21A2P08686 494 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 CALM1P0DP23 149 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 CALM2P0DP24 149 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 CALM3P0DP25 149 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 FGFR4P22455 802 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 HDAC1Q13547 482 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 UBXN2BQ14CS0 331 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 INAVAQ3KP66 663 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 TWF2Q6IBS0 349 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RASSF3Q86WH2 238 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 PLA2G4DQ86XP0 818 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 URGCPQ8TCY9 931 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 ASB15Q8WXK1 588 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LPPQ93052 612 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RBM15Q96T37 977 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RPP25Q9BUL9 199 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 ANO3Q9BYT9 981 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 ZDHHC5Q9C0B5 715 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 C14orf119Q9NWQ9 140 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 DNAJB4Q9UDY4 337 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MTF2Q9Y483 593 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MYO10Q9HD67 2058 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
ATXN3-228ENST00000554592 MYH7BA7E2Y1 1941 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ACACBO00763 2458 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MROH6A6NGR9 719 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FAM86B1E9PN63 330 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CSDE1O75534 798 aaKnown RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FBXO21O94952 628 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms