RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZNF445P59923 1031 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 LMNB2Q03252 620 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TRIP4Q15650 581 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TPD52L1Q16890 204 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 BSPRYQ5W0U4 402 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 GRAMD4Q6IC98 578 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 MSANTD2Q6P1R3 559 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TRIM65Q6PJ69 517 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 GBP6Q6ZN66 633 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 FAM217AQ8IXS0 508 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 CPXM2Q8N436 756 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 FAM160A2Q8N612 972 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 RNF139Q8WU17 664 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 POLR3BQ9NW08 1133 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 FBXO10Q9UK96 956 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 YJEFN3A6XGL0 299 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 PRR5-ARHGAP8B1AHC4 643 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 E7ENQ6 273 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 SART1O43290 800 aaKnown RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 MED7O43513 233 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 KLF8O95600 359 aaPredicted RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 ARHGAP8P85298 464 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 LPAL2Q16609 132 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 MAN2A1Q16706 1144 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 EXOC3L4Q17RC7 722 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 DPCR1Q3MIW9 517 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 PMF1Q6P1K2 205 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 TPGS1Q6ZTW0 290 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 SFTPA1Q8IWL2 248 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 ZNF513Q8N8E2 541 aaPredicted RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 NAT16Q8N8M0 369 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 TXNDC5Q8NBS9 432 aaKnown RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 GOLGA1Q92805 767 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 GBP4Q96PP9 640 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 TRIM62Q9BVG3 475 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 PARD6AQ9NPB6 346 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 UBE2TQ9NPD8 197 aaPredicted RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 LMBRD1Q9NUN5 540 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 APEX2Q9UBZ4 518 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 STOML2Q9UJZ1 356 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 AGO1Q9UL18 857 aaKnown RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC27A6Q9Y2P4 619 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 PCDHGA5Q9Y5G8 931 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 ABCA7Q8IZY2 2146 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 TNRC6BQ9UPQ9 1833 aaKnown RBP10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 CEP192Q8TEP8 1941 aa10.88□□□□□ -0.67
PTCD2P1-201ENST00000554393 CKAP5Q14008 2032 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 SGK1O00141 431 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 NPC1O15118 1278 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 ADAM23O75077 832 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 EPN2O95208 641 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 CYBBP04839 570 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 CISD3P0C7P0 127 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 KRT5P13647 590 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 LCP1P13796 627 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 GNA15P30679 374 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 GPD2P43304 727 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 ACADSBP45954 432 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 MTIF2P46199 727 aaKnown RBP10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 HARS2P49590 506 aaKnown RBP10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 DGKGP49619 791 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 RGS7P49802 495 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 SPEM2Q0P670 501 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 E2F5Q15329 346 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 ELF2Q15723 593 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 CSRP2Q16527 193 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 USP39Q53GS9 565 aaKnown RBP10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 FYB2Q5VWT5 728 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 BEND5Q7L4P6 421 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 FMNL3Q8IVF7 1028 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 CCDC33Q8N5R6 958 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 OLIG1Q8TAK6 271 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 SHC3Q92529 594 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 NDRG1Q92597 394 aaKnown RBP10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 CRACR2AQ9BSW2 395 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC2A11Q9BYW1 496 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 POLMQ9NP87 494 aaPredicted RBP10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 USP18Q9UMW8 372 aa10.87□□□□□ -0.67
PTCD2P1-201ENST00000554393 MAP1BP46821 2468 aaKnown RBP10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 ANTXRLA6NF34 631 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 GFRA2O00451 464 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 RHOBTB1O94844 696 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 IGLV3-27P01718 113 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 LTFP02788 710 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 HMBSP08397 361 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 HNRNPLP14866 589 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC9A1P19634 815 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 PON1P27169 355 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 NTSR1P30989 418 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 RING1Q06587 406 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 NNTQ13423 1086 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 PLK5Q496M5 336 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms