RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 YME1L1Q96TA2 773 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PAFAH2Q99487 392 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 CIB1Q99828 191 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZBED2Q9BTP6 218 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZNF395Q9H8N7 513 aaPredicted RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 PARVAQ9NVD7 372 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PTBP2Q9UKA9 531 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 DENND3A2RUS2 1198 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 ARHGEF35A5YM69 484 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 H7C0C1 242 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 SPAG6O75602 509 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 FTLP02792 175 aaPredicted RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 POLR2CP19387 275 aaPredicted RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 OPRL1P41146 370 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 SLC26A2P50443 739 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 EIF3EP60228 445 aaKnown RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 OTUD4Q01804 1114 aaKnown RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 NME3Q13232 169 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 TUBA3CQ13748 450 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 DPYSQ14117 519 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 PPP2R5DQ14738 602 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 ZNF846Q147U1 533 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 PGS1Q32NB8 556 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 DCAF17Q5H9S7 520 aaPredicted RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 BRINP3Q76B58 766 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 AKAP14Q86UN6 197 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 SLC20A1Q8WUM9 679 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 RAPGEF4Q8WZA2 1011 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 SERAC1Q96JX3 654 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 VPS35Q96QK1 796 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 AIFM2Q9BRQ8 373 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 TMEM79Q9BSE2 394 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 ANKRD60Q9BZ19 345 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 NEK6Q9HC98 313 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 C12orf4Q9NQ89 552 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 AVENQ9NQS1 362 aaPredicted RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 SEPT11Q9NVA2 429 aaKnown RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 STK39Q9UEW8 545 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 HMGXB4Q9UGU5 601 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 APOBEC2Q9Y235 224 aaKnown RBP9.84□□□□□ -0.83
SIX4-202ENST00000554079 SPEF1Q9Y4P9 236 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 ROBO3Q96MS0 1386 aa9.84□□□□□ -0.83
SIX4-202ENST00000554079 ZNF839A8K0R7 811 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 CCNT1O60563 726 aaKnown RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 SNNO75324 88 aaPredicted RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 NCAM1P13591 858 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 RPL10P27635 214 aaKnown RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 PHKA1P46020 1223 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
SIX4-202ENST00000554079 ZNF132P52740 706 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 B2MP61769 119 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 BASP1P80723 227 aaKnown RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 IKBKEQ14164 716 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 TFDP1Q14186 410 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ARHGAP44Q17R89 818 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SMU1Q2TAY7 513 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 LETM2Q2VYF4 491 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ATG16L1Q676U5 607 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 KRT80Q6KB66 452 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 TMC5Q6UXY8 1006 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ELMOD2Q8IZ81 293 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SPARTQ8N0X7 666 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 RILPQ96NA2 401 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 CDK5RAP1Q96SZ6 601 aaKnown RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 EMILIN2Q9BXX0 1053 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ANO3Q9BYT9 981 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 MARCOQ9UEW3 520 aaPredicted RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 DNAJC12Q9UKB3 198 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 KIAA1551Q9HCM1 1747 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SNTNA6NMZ2 147 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 B8ZZF3 427 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 KCNJ13O60928 360 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 KITP10721 976 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 GALK2Q01415 458 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 FAAP100Q0VG06 881 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 RALGDSQ12967 914 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 KLF1Q13351 362 aaPredicted RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 PEX6Q13608 980 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ECM1Q16610 540 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ESCO1Q5FWF5 840 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SLC10A5Q5PT55 438 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 UBE2UQ5VVX9 321 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SLFN13Q68D06 897 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 PLEKHG7Q6ZR37 379 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 FRMD7Q6ZUT3 714 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 TNIP2Q8NFZ5 429 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 IP6K1Q92551 441 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 SH3YL1Q96HL8 342 aaPredicted RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 CNDP2Q96KP4 475 aaKnown RBP9.83□□□□□ -0.84
SIX4-202ENST00000554079 FAM20AQ96MK3 541 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 MTMR9Q96QG7 549 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 COQ7Q99807 217 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 MECRQ9BV79 373 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 OR2B2Q9GZK3 357 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 C20orf27Q9GZN8 174 aa9.83□□□□□ -0.84
SIX4-202ENST00000554079 ACSS3Q9H6R3 686 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms