RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 DLG4P78352 724 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 EHHADHQ08426 723 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 SEMA3BQ13214 749 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 WDR45BQ5MNZ6 344 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 PEAR1Q5VY43 1037 aaPredicted RBP9.29□□□□□ -0.92
TDP1-208ENST00000553989 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 TOGARAM2Q6ZUX3 1019 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 HTR3DQ70Z44 454 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 GPRIN1Q7Z2K8 1008 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 UNC93AQ86WB7 457 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 CCDC150Q8NCX0 1101 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 TAF4BQ92750 862 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 GATA6Q92908 595 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 FOXJ1Q92949 421 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 DUSP9Q99956 384 aaKnown RBP9.29□□□□□ -0.92
TDP1-208ENST00000553989 KLF16Q9BXK1 252 aaPredicted RBP9.29□□□□□ -0.92
TDP1-208ENST00000553989 SLC6A17Q9H1V8 727 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 FAM124BQ9H5Z6 455 aaPredicted RBP9.29□□□□□ -0.92
TDP1-208ENST00000553989 MMRN2Q9H8L6 949 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 CAPN10Q9HC96 672 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 IL37Q9NZH6 218 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 RASAL2Q9UJF2 1139 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 NAGPAQ9UK23 515 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 WASF3Q9UPY6 502 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 STARD13Q9Y3M8 1113 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 ADGRG1Q9Y653 693 aa9.29□□□□□ -0.92
TDP1-208ENST00000553989 FAM237AA0A1B0GTK4 181 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 A0A1W2PQH9 124 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 SRRM3A6NNA2 597 aaPredicted RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 PRRT4C9JH25 899 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 H0Y626 953 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 IKBKBO14920 756 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CTIFO43310 598 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CALUO43852 315 aaPredicted RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 SYNCRIPO60506 623 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 TRIM16O95361 564 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 HLA-DRAP01903 254 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 HMBSP08397 361 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MAOBP27338 520 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 ASPAP45381 313 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 ARID5AQ03989 594 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 STK4Q13043 487 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 HNRNPDQ14103 355 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 TPD52L1Q16890 204 aaPredicted RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 ZACNQ401N2 412 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 CLEC20AQ6ZU45 233 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 RSRC2Q7L4I2 434 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 PIP4P1Q86T03 277 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CACUL1Q86Y37 369 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 SLC41A1Q8IVJ1 513 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 LRRC8AQ8IWT6 810 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CRYBG2Q8N1P7 616 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CHCHD4Q8N4Q1 142 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 UCMAQ8WVF2 138 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CYFIP2Q96F07 1278 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CCDC34Q96HJ3 373 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MRGPRX1Q96LB2 322 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 GABRG3Q99928 467 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 NT5C1AQ9BXI3 368 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MIR1-1HGQ9H1L0 117 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 KCNF1Q9H3M0 494 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CSNK1G1Q9HCP0 422 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 CD93Q9NPY3 652 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 OSER1Q9NX31 292 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 HCN2Q9UL51 889 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 SCML2Q9UQR0 700 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 PCDHA5Q9Y5H7 936 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 ASCC3Q8N3C0 2202 aaKnown RBP9.28□□□□□ -0.92
TDP1-208ENST00000553989 CEP295Q9C0D2 2601 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 MYH10P35580 1976 aa9.28□□□□□ -0.92
TDP1-208ENST00000553989 PLXND1Q9Y4D7 1925 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 MYO18AQ92614 2054 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 GON4LQ3T8J9 2241 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CACNA1GO43497 2377 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 UPK3BL1B0FP48 263 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 WASH3PC4AMC7 463 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 UPK3BL2E5RIL1 263 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 GFRA2O00451 464 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 PDXKO00764 312 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZNF202O95125 648 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ASS1P00966 412 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 CYBBP04839 570 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ACADMP11310 421 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 KRT13P13646 458 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CD6P30203 668 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 VAMP7P51809 220 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms