RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GRID2O43424 1007 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 IFIT2P09913 472 aaKnown RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 GOLGA6DP0CG33 693 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 HGFP14210 728 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 ADRA1DP25100 572 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 IDUAP35475 653 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 PIN1Q13526 163 aaPredicted RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 DHX8Q14562 1220 aaKnown RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 PTGR1Q14914 329 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 ASPHD1Q5U4P2 390 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 ZNF783Q6ZMS7 281 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 USP49Q70CQ1 688 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 GRAMD1CQ8IYS0 662 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 TMEM199Q8N511 208 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 OR56A3Q8NH54 315 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 TTC8Q8TAM2 541 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 NT5C1BQ96P26 610 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 USP29Q9HBJ7 922 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 MOV10Q9HCE1 1003 aaKnown RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 CHST12Q9NRB3 414 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 VPS45Q9NRW7 570 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 GOLGA6AQ9NYA3 693 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 NKX1-2Q9UD57 310 aaPredicted RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 AGO2Q9UKV8 859 aaKnown RBP2.77□□□□□ -1.97
SRP54-204ENST00000553923 DAAM1Q9Y4D1 1078 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 VSTM5A8MXK1 200 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 F8W810 466 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 OFD1O75665 1012 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 PARP1P09874 1014 aaKnown RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 MLH1P40692 756 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 GATMP50440 423 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 NEK3P51956 506 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 SLC12A2P55011 1212 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 RRP1P56182 461 aaKnown RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 FOXD4Q12950 439 aaPredicted RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 SLC13A2Q13183 592 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 SLC4A8Q2Y0W8 1093 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 GFOD2Q3B7J2 385 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 RBM44Q6ZP01 1051 aaKnown RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 TRILQ7L0X0 811 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 RTL10Q7L3V2 364 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 SAMD3Q8N6K7 520 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 VPS37AQ8NEZ2 397 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 C1GALT1C1Q96EU7 318 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 PRR11Q96HE9 360 aaPredicted RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 NUP88Q99567 741 aaPredicted RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 SLC12A5Q9H2X9 1139 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 TCF7L1Q9HCS4 588 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 THSD1Q9NS62 852 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 IP6K2Q9UHH9 426 aa2.76□□□□□ -1.97
SRP54-204ENST00000553923 LAS1LQ9Y4W2 734 aaKnown RBP2.76□□□□□ -1.97
SRP54-204ENST00000553923 A0A1B0GUV1 79 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 IFRD1O00458 451 aaPredicted RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 CCP110O43303 1012 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PRPF3O43395 683 aaKnown RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 CA12O43570 354 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 RRP9O43818 475 aaKnown RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 CAMTA2O94983 1202 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PF4V1P10720 104 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 MTHFSP49914 203 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PGDP52209 483 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 JAK3P52333 1124 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 GAS1P54826 345 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 DSCR9P59020 149 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 EGR4Q05215 589 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 DNASE1L3Q13609 305 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 RAB32Q13637 225 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 GRAMD1BQ3KR37 738 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 IFIT1BQ5T764 474 aaKnown RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 HIST2H2BCQ6DN03 193 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 IL31Q6EBC2 164 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 NADSYN1Q6IA69 706 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 MICU3Q86XE3 530 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 MPP5Q8N3R9 675 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 FAM71DQ8N9W8 422 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 OR6B3Q8NGW1 331 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 ELP5Q8TE02 316 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PPM1EQ8WY54 764 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PIGKQ92643 395 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 TIFAQ96CG3 184 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 LRGUKQ96M69 825 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PPP1R9BQ96SB3 815 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 PIMREGQ9BSJ6 248 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 RTFDC1Q9BY42 306 aaPredicted RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 RBM38Q9H0Z9 239 aaKnown RBP2.75□□□□□ -1.97
SRP54-204ENST00000553923 ZNF556Q9HAH1 456 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 FZD3Q9NPG1 666 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 ARL8BQ9NVJ2 186 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 WNT16Q9UBV4 365 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 FAM50BQ9Y247 325 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 ANKRD6Q9Y2G4 727 aa2.75□□□□□ -1.97
SRP54-204ENST00000553923 KIR2DS5A0A0G2JLQ3 304 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 LOC102723971A0A1B0GUV8 181 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 E2F8A0AVK6 867 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 SERINC4A6NH21 518 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 H7C4K7 107 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 KIR2DS3K7RE56 304 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 PRPF4O43172 522 aaKnown RBP eCLIP2.74□□□□□ -1.97
SRP54-204ENST00000553923 TBC1D4O60343 1298 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms