RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 SH2D6Q7Z4S9 175 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 DDX42Q86XP3 938 aaKnown RBP eCLIP2.02□□□□□ -2.09
KTN1-211ENST00000553710 C11orf44Q8N8P7 122 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 CLEC18CQ8NCF0 446 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 OR6B3Q8NGW1 331 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 INPP5DQ92835 1189 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 PPP1R9BQ96SB3 815 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 RETREG1Q9H6L5 497 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 ARMT1Q9H993 441 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 TCF7L2Q9NQB0 619 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 G3BP2Q9UN86 482 aaKnown RBP2.02□□□□□ -2.09
KTN1-211ENST00000553710 TBX22Q9Y458 520 aa2.02□□□□□ -2.09
KTN1-211ENST00000553710 DPPA5A6NC42 116 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 TTC34A8MYJ7 566 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 CA12O43570 354 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 AP1G1O43747 822 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 SNX2O60749 519 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 CLSTN1O94985 981 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 GLUD1P00367 558 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 IGLV2-11P01706 119 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 PARP1P09874 1014 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 TMIGD3P0DMS9 266 aaPredicted RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 HGFP14210 728 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 GM2AP17900 193 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 GLUD2P49448 558 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 VPS41P49754 854 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 ARFIP2P53365 341 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 DLX5P56178 289 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 EIF4A1P60842 406 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 EEF1A2Q05639 463 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 Q0VFX4 171 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 RBM39Q14498 530 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 CCDC6Q16204 474 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 C9orf57Q5W0N0 161 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 PARM1Q6UWI2 310 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 ARMC9Q7Z3E5 817 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 METTL25Q8N6Q8 603 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 C7orf57Q8NEG2 295 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 CELF1Q92879 486 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 EME1Q96AY2 570 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 MVB12AQ96EY5 273 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 DUX5Q96PT3 197 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 SENP7Q9BQF6 1050 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 TTLL2Q9BWV7 592 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 C1QTNF4Q9BXJ3 329 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 FAM126AQ9BYI3 521 aaPredicted RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 TRIM54Q9BYV2 358 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 SPRY4Q9C004 299 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 CCDC8Q9H0W5 538 aaPredicted RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 TMX1Q9H3N1 280 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 AAMDCQ9H7C9 122 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 A1CFQ9NQ94 594 aaKnown RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 VPS45Q9NRW7 570 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 DNAJB11Q9UBS4 358 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 UTS2RQ9UKP6 389 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 MAGED2Q9UNF1 606 aaPredicted RBP2.01□□□□□ -2.09
KTN1-211ENST00000553710 STXBP5LQ9Y2K9 1186 aa2.01□□□□□ -2.09
KTN1-211ENST00000553710 LOC102724159A0A0B4J2E5 919 aa2□□□□□ -2.09
KTN1-211ENST00000553710 LOC102723971A0A1B0GUV8 181 aa2□□□□□ -2.09
KTN1-211ENST00000553710 TLDC2A0PJX2 215 aa2□□□□□ -2.09
KTN1-211ENST00000553710 TMEM233B4DJY2 109 aa2□□□□□ -2.09
KTN1-211ENST00000553710 INAFM1C9JVW0 142 aa2□□□□□ -2.09
KTN1-211ENST00000553710 MDM4O15151 490 aa2□□□□□ -2.09
KTN1-211ENST00000553710 SLC16A5O15375 505 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CCP110O43303 1012 aa2□□□□□ -2.09
KTN1-211ENST00000553710 ZBTB11O95625 1053 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 LDLRP01130 860 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CYP1A2P05177 515 aa2□□□□□ -2.09
KTN1-211ENST00000553710 RECQLP46063 649 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 CLCN5P51795 746 aa2□□□□□ -2.09
KTN1-211ENST00000553710 AGFG1P52594 562 aaKnown RBP2□□□□□ -2.09
KTN1-211ENST00000553710 SEC61A1P61619 476 aaKnown RBP2□□□□□ -2.09
KTN1-211ENST00000553710 KIF5AQ12840 1032 aa2□□□□□ -2.09
KTN1-211ENST00000553710 TRAF2Q12933 501 aa2□□□□□ -2.09
KTN1-211ENST00000553710 SLC13A2Q13183 592 aa2□□□□□ -2.09
KTN1-211ENST00000553710 DNASE1L3Q13609 305 aa2□□□□□ -2.09
KTN1-211ENST00000553710 PWP2Q15269 919 aaKnown RBP2□□□□□ -2.09
KTN1-211ENST00000553710 ZRSR1Q15695 479 aaKnown RBP2□□□□□ -2.09
KTN1-211ENST00000553710 ZDHHC24Q6UX98 284 aa2□□□□□ -2.09
KTN1-211ENST00000553710 Q6ZTK2 550 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CREB3L2Q70SY1 520 aa2□□□□□ -2.09
KTN1-211ENST00000553710 H1FNTQ75WM6 255 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 KCTD20Q7Z5Y7 419 aa2□□□□□ -2.09
KTN1-211ENST00000553710 DAAM2Q86T65 1068 aa2□□□□□ -2.09
KTN1-211ENST00000553710 P3H2Q8IVL5 708 aa2□□□□□ -2.09
KTN1-211ENST00000553710 ARL14EPQ8N8R7 260 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 SPSB4Q96A44 273 aa2□□□□□ -2.09
KTN1-211ENST00000553710 RTP4Q96DX8 246 aa2□□□□□ -2.09
KTN1-211ENST00000553710 ZNF668Q96K58 619 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 NODALQ96S42 347 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CGRRF1Q99675 332 aa2□□□□□ -2.09
KTN1-211ENST00000553710 ZNF518BQ9C0D4 1074 aa2□□□□□ -2.09
KTN1-211ENST00000553710 PLAC1Q9HBJ0 212 aa2□□□□□ -2.09
KTN1-211ENST00000553710 ASNSD1Q9NWL6 643 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2□□□□□ -2.09
KTN1-211ENST00000553710 RIMKLBQ9ULI2 386 aa2□□□□□ -2.09
KTN1-211ENST00000553710 PAXBP1Q9Y5B6 917 aa2□□□□□ -2.09
KTN1-211ENST00000553710 PTGDR2Q9Y5Y4 395 aa2□□□□□ -2.09
KTN1-211ENST00000553710 DOCK7Q96N67 2140 aa2□□□□□ -2.09
KTN1-211ENST00000553710 CKAP5Q14008 2032 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms