RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MCM3APO60318 1980 aa6.66□□□□□ -1.34
ATXN3-223ENST00000553686 FOCADQ5VW36 1801 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 A0A0A6YYK5 440 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 CCDC195A0A1B0GUA6 201 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 CTSAP10619 480 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 TOP1P11387 765 aaKnown RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 CCR3P51677 355 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 FAM189BP81408 668 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 DHCR24Q15392 516 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 MAN2A1Q16706 1144 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 SPDYAQ5MJ70 313 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 DAB2IPQ5VWQ8 1189 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 C19orf48Q6RUI8 117 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 THNSL2Q86YJ6 484 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 SLC5A5Q92911 643 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 PHKBQ93100 1093 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 GPHA2Q96T91 129 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 SOX7Q9BT81 388 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 ANO3Q9BYT9 981 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 FAM49AQ9H0Q0 323 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 COL20A1Q9P218 1284 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 NEUROG3Q9Y4Z2 214 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 PCDHA1Q9Y5I3 950 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
ATXN3-223ENST00000553686 TRIP12Q14669 1992 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-223ENST00000553686 CLUHO75153 1309 aa6.65□□□□□ -1.35
ATXN3-223ENST00000553686 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 DSPP15924 2871 aaKnown RBP6.64□□□□□ -1.35
ATXN3-223ENST00000553686 PRSS38A1L453 326 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 MATN3O15232 486 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 RPS6KA5O75582 802 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 FSBPO95073 299 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CFBP00751 764 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CEACAM1P13688 526 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 BPIP17213 487 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 TNFRSF1AP19438 455 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CCND2P30279 289 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 PBX3P40426 434 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 MASP1P48740 699 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 HHEXQ03014 270 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 STRN3Q13033 797 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 MTAPQ13126 283 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 HTR4Q13639 388 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 SF3A2Q15428 464 aaKnown RBP6.64□□□□□ -1.35
ATXN3-223ENST00000553686 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
ATXN3-223ENST00000553686 LRRC55Q6ZSA7 311 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 MTSS1LQ765P7 747 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 ADGRE4PQ86SQ3 457 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 D2HGDHQ8N465 521 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 SAMD3Q8N6K7 520 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 RSPH1Q8WYR4 309 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 ZBP1Q9H171 429 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 BOLA2Q9H3K6 86 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 IFT22Q9H7X7 185 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 CAAP1Q9H8G2 361 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 IL17RBQ9NRM6 502 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 ERAP1Q9NZ08 941 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 KDM3AQ9Y4C1 1321 aa6.64□□□□□ -1.35
ATXN3-223ENST00000553686 UBE2QL1A1L167 161 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 NEMP1O14524 444 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 RANBP6O60518 1105 aaKnown RBP6.63□□□□□ -1.35
ATXN3-223ENST00000553686 STAM2O75886 525 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 TOX4O94842 621 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 VSIG10L2P0DP72 767 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 CD72P21854 359 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 KIR2DL3P43628 341 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 CXCL12P48061 93 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 NOVP48745 357 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 CLCN4P51793 760 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 ZNF543Q08ER8 600 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 TMEM266Q2M3C6 531 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 GAGE13Q4V321 117 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 MARCH8Q5T0T0 291 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 STOX1Q6ZVD7 989 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 GAREM2Q75VX8 874 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 STRA8Q7Z7C7 330 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 LONP2Q86WA8 852 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 RASSF3Q86WH2 238 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 ZNF808Q8N4W9 903 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-223ENST00000553686 AUTS2Q8WXX7 1259 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 SMG7Q92540 1137 aaKnown RBP6.63□□□□□ -1.35
ATXN3-223ENST00000553686 TTC1Q99614 292 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 HNRNPABQ99729 332 aaKnown RBP6.63□□□□□ -1.35
ATXN3-223ENST00000553686 MRPL9Q9BYD2 267 aaKnown RBP6.63□□□□□ -1.35
ATXN3-223ENST00000553686 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 IL1RAPL2Q9NP60 686 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 ST3GAL5Q9UNP4 418 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 PCDHB6Q9Y5E3 794 aa6.63□□□□□ -1.35
ATXN3-223ENST00000553686 PARP14Q460N5 1801 aa6.62□□□□□ -1.35
ATXN3-223ENST00000553686 MGEA5O60502 916 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms