RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 HAUS4Q9H6D7 363 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 AIPL1Q9NZN9 384 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 ITIH6Q6UXX5 1313 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 IRAK2O43187 625 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 GALR2O43603 387 aaPredicted RBP23.75■■□□□ 1.39
TDP1-206ENST00000553569 GYPCP04921 128 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 TNFAIP3P21580 790 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 MAGEA9P43362 315 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 RPS9P46781 194 aaKnown RBP23.75■■□□□ 1.39
TDP1-206ENST00000553569 CENPCQ03188 943 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 KLHL30Q0D2K2 578 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 NNTQ13423 1086 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 CCINQ13939 588 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 DGKKQ5KSL6 1271 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 Q6ZS52 159 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 PRSS33Q8NF86 280 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 IQCDQ96DY2 449 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 FCRL2Q96LA5 508 aaPredicted RBP23.75■■□□□ 1.39
TDP1-206ENST00000553569 SPATA6Q9NWH7 488 aaPredicted RBP23.75■■□□□ 1.39
TDP1-206ENST00000553569 DDIT4Q9NX09 232 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 TLR6Q9Y2C9 796 aa23.75■■□□□ 1.39
TDP1-206ENST00000553569 MOCS2O96007 188 aaPredicted RBP23.74■■□□□ 1.39
TDP1-206ENST00000553569 SKILP12757 684 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 TYRP14679 529 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 CHKAP35790 457 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 SCNN1AP37088 669 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 RING1Q06587 406 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 UNC45BQ8IWX7 931 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 SYT11Q9BT88 431 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 RBSNQ9H1K0 784 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 CHRDQ9H2X0 955 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 METTL5Q9NRN9 209 aaKnown RBP23.74■■□□□ 1.39
TDP1-206ENST00000553569 PLK2Q9NYY3 685 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.74■■□□□ 1.39
TDP1-206ENST00000553569 ADAM22Q9P0K1 906 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 MARK1Q9P0L2 795 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 WDR35Q9P2L0 1181 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 CAPN11Q9UMQ6 739 aa23.74■■□□□ 1.39
TDP1-206ENST00000553569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.74■■□□□ 1.39
TDP1-206ENST00000553569 ATG2BQ96BY7 2078 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 IGLV3-25P01717 112 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 DRD1P21728 446 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 NOS2P35228 1153 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 PRKCIP41743 596 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 SLC11A2P49281 568 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 NUBP1P53384 320 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 ZBED6P86452 979 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 TDRD12Q587J7 1177 aaKnown RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 ZC3H12AQ5D1E8 599 aaKnown RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 ZNF571Q7Z3V5 609 aaPredicted RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 CPXM2Q8N436 756 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 OLIG1Q8TAK6 271 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 SLC39A13Q96H72 371 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 PNKPQ96T60 521 aa23.73■■□□□ 1.39
TDP1-206ENST00000553569 NUCKS1Q9H1E3 243 aaKnown RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 DNAJC17Q9NVM6 304 aaKnown RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 LUC7L2Q9Y383 392 aaKnown RBP23.73■■□□□ 1.39
TDP1-206ENST00000553569 TMCO5BA8MYB1 307 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.72■■□□□ 1.39
TDP1-206ENST00000553569 TSPAN3O60637 253 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 TULP3O75386 442 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 LATS1O95835 1130 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 APOEP02649 317 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 CASP14P31944 242 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 GBP1P32455 592 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 EIF2DP41214 584 aaKnown RBP23.72■■□□□ 1.39
TDP1-206ENST00000553569 MATKP42679 507 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 SULT1E1P49888 294 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 MESP2Q0VG99 397 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 PTP4A2Q12974 167 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 MTAPQ13126 283 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 NME3Q13232 169 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 SPECC1LQ69YQ0 1117 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 PHF13Q86YI8 300 aaPredicted RBP23.72■■□□□ 1.39
TDP1-206ENST00000553569 ETFBKMTQ8IXQ9 262 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 FAM217AQ8IXS0 508 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 EZH1Q92800 747 aaPredicted RBP23.72■■□□□ 1.39
TDP1-206ENST00000553569 RNF34Q969K3 372 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 P2RY11Q96G91 374 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 XPO6Q96QU8 1125 aaKnown RBP23.72■■□□□ 1.39
TDP1-206ENST00000553569 PRRX2Q99811 253 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 ARHGEF4Q9NR80 690 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 TAS2R14Q9NYV8 317 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 STAP1Q9ULZ2 295 aa23.72■■□□□ 1.39
TDP1-206ENST00000553569 GOLGA6L7A0A1B0GV03 622 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 M0QYT0 321 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 CACNG3O60359 315 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 ACSL4O60488 711 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 RNF40O75150 1001 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 GJB6O95452 261 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 CYBBP04839 570 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 APODP05090 189 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 CALB1P05937 261 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 FLT3P36888 993 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 GAS6Q14393 721 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 ADGRF1Q5T601 910 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 MON1BQ7L1V2 547 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 GAS2L3Q86XJ1 694 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 C1orf210Q8IVY1 113 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 VSTM4Q8IW00 320 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms