RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MMRN1Q13201 1228 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 EFHC2Q5JST6 749 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 BRMS1LQ5PSV4 323 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 C10orf120Q5SQS8 335 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 RTL10Q7L3V2 364 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 TDHQ8IZJ6 230 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 SLC22A17Q8WUG5 538 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 ARNTL2Q8WYA1 636 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 RNF34Q969K3 372 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 RNF157Q96PX1 679 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 KRT12Q99456 494 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 TKTL2Q9H0I9 626 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 LMAN2LQ9H0V9 348 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 PLEKHA4Q9H4M7 779 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 CCSER2Q9H7U1 834 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 SLC28A3Q9HAS3 691 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 ARHGEF38Q9NXL2 777 aa14.27□□□□□ -0.12
APEX1-205ENST00000553555 RANBP2P49792 3224 aaKnown RBP14.27□□□□□ -0.13
APEX1-205ENST00000553555 NUP205Q92621 2012 aa14.27□□□□□ -0.13
APEX1-205ENST00000553555 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 F11P03951 625 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 PPP2R5DQ14738 602 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 CYP1B1Q16678 543 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 PPP6R3Q5H9R7 873 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 BBS12Q6ZW61 710 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 RFX6Q8HWS3 928 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 KLHL7Q8IXQ5 586 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 PYROXD2Q8N2H3 581 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 SLC39A13Q96H72 371 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 CDK5RAP1Q96SZ6 601 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 ZNF670Q9BS34 389 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 MAK16Q9BXY0 300 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 DDX47Q9H0S4 455 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 ZNF334Q9HCZ1 680 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.26□□□□□ -0.13
APEX1-205ENST00000553555 TLR6Q9Y2C9 796 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 NOTCH4Q99466 2003 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 TNRC18O15417 2968 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 DOCK4Q8N1I0 1966 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 KCNU1A8MYU2 1149 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 CST8O60676 142 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 PHF2O75151 1096 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 ZMYND10O75800 440 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 CCR1P32246 355 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 ATP5C1P36542 298 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 RGS19P49795 217 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 TBX4P57082 545 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 NNTQ13423 1086 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 PABPC1LQ4VXU2 614 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 PPM1LQ5SGD2 360 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 HECTD3Q5T447 861 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 TMEM150AQ86TG1 271 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 ELMOD1Q8N336 334 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 C12orf50Q8NA57 414 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 PCDH19Q8TAB3 1148 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 FCRL2Q96LA5 508 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 LRRC1Q9BTT6 524 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 LRRC3Q9BY71 257 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 LRRC19Q9H756 370 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 IL21Q9HBE4 155 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 HOMER3Q9NSC5 361 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 MARCH2Q9P0N8 246 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 RCOR3Q9P2K3 495 aaPredicted RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
APEX1-205ENST00000553555 R3HDM2Q9Y2K5 976 aaKnown RBP14.26□□□□□ -0.13
APEX1-205ENST00000553555 EPOPA6NHQ4 379 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 PER2O15055 1255 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 RHOXF2BP0C7M4 288 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 EPCAMP16422 314 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 CHRNA3P32297 505 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 SEMA3BQ13214 749 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 TFDP2Q14188 446 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 TRIP4Q15650 581 aaPredicted RBP14.25□□□□□ -0.13
APEX1-205ENST00000553555 GLE1Q53GS7 698 aaKnown RBP14.25□□□□□ -0.13
APEX1-205ENST00000553555 KLHDC10Q6PID8 442 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 PQLC3Q8N755 202 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 GDPD5Q8WTR4 605 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 C1orf54Q8WWF1 131 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 MAGOHBQ96A72 148 aaKnown RBP14.25□□□□□ -0.13
APEX1-205ENST00000553555 HAPLN3Q96S86 360 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 RHOXF2Q9BQY4 288 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 DCLK3Q9C098 648 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 OSBPL2Q9H1P3 480 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 SLITRK6Q9H5Y7 841 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 DNMT3LQ9UJW3 386 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 TRANK1O15050 2925 aa14.25□□□□□ -0.13
APEX1-205ENST00000553555 SLC12A8A0AV02 714 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 FAM72CH0Y354 149 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 CCL16O15467 120 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 SLC2A3P11169 496 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 GOT1P17174 413 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
APEX1-205ENST00000553555 ARL4AP40617 200 aa14.24□□□□□ -0.13
APEX1-205ENST00000553555 TUBP50607 506 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms