RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 GPANK1O95872 356 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 CSH1P0DML2 217 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 CSH2P0DML3 217 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 BFSP2Q13515 415 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TDGQ13569 410 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 DYRK1AQ13627 763 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 THOC5Q13769 683 aaKnown RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 CBFBQ13951 182 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 HLXQ14774 488 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TAF11Q15544 211 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 MLANAQ16655 118 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 ST3GAL2Q16842 350 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 AAK1Q2M2I8 961 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 DCAF17Q5H9S7 520 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 IZUMO1Q8IYV9 350 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TAGAPQ8N103 731 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 OR56A1Q8NGH5 318 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 SH3KBP1Q96B97 665 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 KIF1BPQ96EK5 621 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 MPHOSPH9Q99550 1183 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 MUC13Q9H3R2 512 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 BRF2Q9HAW0 419 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 KCNK9Q9NPC2 374 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TRIM36Q9NQ86 728 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 SLC25A10Q9UBX3 287 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 RAB21Q9UL25 225 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 TRPC5Q9UL62 973 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 PCDHGB4Q9UN71 923 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
SCFD1-208ENST00000553278 DRG1Q9Y295 367 aaKnown RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 USP15Q9Y4E8 981 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-208ENST00000553278 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 PRAMEF33A0A0G2JMD5 474 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 GOLGA6L10A0A0M3HER8 536 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 AGAP5A6NIR3 686 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 VILLO15195 856 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 DHX16O60231 1041 aaKnown RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 PRAMEF10O60809 474 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 GLULP15104 373 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 PI3P19957 117 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 FGFR4P22455 802 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 NFKBIAP25963 317 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 GRK5P34947 590 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 RCAN1P53805 252 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 CDH15P55291 814 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 SNX16P57768 344 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 NLRP5P59047 1200 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 HSD11B2P80365 405 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 NHLH2Q02577 135 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 FPGSQ05932 587 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 CDC16Q13042 620 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 MTAPQ13126 283 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 TUBB3Q13509 450 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 FAM90A2PQ658T7 463 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 SZRD1Q7Z422 152 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 ADGRG6Q86SQ4 1221 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 ZNF761Q86XN6 746 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 CCDC105Q8IYK2 499 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 TTC30BQ8N4P2 665 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 CXorf38Q8TB03 319 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 SNX19Q92543 992 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 ATP6V1E2Q96A05 226 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 ARRDC3Q96B67 414 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-208ENST00000553278 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 LMF1Q96S06 567 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 OSBPL9Q96SU4 736 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 MXD3Q9BW11 206 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 MROH8Q9H579 483 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 SEC61A2Q9H9S3 476 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 ERVK-5Q9HDB9 667 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 RCE1Q9Y256 329 aa6.31□□□□□ -1.4
SCFD1-208ENST00000553278 KDM3AQ9Y4C1 1321 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 A0A1W2PS29 197 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 MYADML2A6NDP7 307 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 H7C0S8 307 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 M0QYT0 321 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 NKX2-8O15522 239 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 SPARCP09486 303 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 ACP5P13686 325 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 MMP8P22894 467 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 BSGP35613 385 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 RGS2P41220 211 aa6.3□□□□□ -1.4
SCFD1-208ENST00000553278 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms