RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ARID5AQ03989 594 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
GPN3-208ENST00000550974 MORC3Q14149 939 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 C14orf80Q86SX3 495 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 SLC25A45Q8N413 288 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 ZNF366Q8N895 744 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 HTR3CQ8WXA8 447 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 SERAC1Q96JX3 654 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 JAKMIP1Q96N16 626 aaKnown RBP11.92□□□□□ -0.5
GPN3-208ENST00000550974 MSTO1Q9BUK6 570 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 RUSC1Q9BVN2 902 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 ASB7Q9H672 318 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 ELOVL2Q9NXB9 296 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 FBXO10Q9UK96 956 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 SLC27A6Q9Y2P4 619 aa11.92□□□□□ -0.5
GPN3-208ENST00000550974 ITPR2Q14571 2701 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 GREM1O60565 184 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 GP1BAP07359 652 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 RNF224P0DH78 156 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 TGM2P21980 687 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 YWHAQP27348 245 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 CDC25AP30304 524 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 POLR2BP30876 1174 aaKnown RBP11.91□□□□□ -0.5
GPN3-208ENST00000550974 PNPLA4P41247 253 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 GALCP54803 685 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 TTC31Q49AM3 519 aaPredicted RBP11.91□□□□□ -0.5
GPN3-208ENST00000550974 MANEAQ5SRI9 462 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 NCEH1Q6PIU2 408 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 VASH2Q86V25 355 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 ZC3H18Q86VM9 953 aaKnown RBP11.91□□□□□ -0.5
GPN3-208ENST00000550974 PDZD8Q8NEN9 1154 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 OR4C6Q8NH72 309 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 WDR36Q8NI36 951 aaKnown RBP11.91□□□□□ -0.5
GPN3-208ENST00000550974 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 ARRDC3Q96B67 414 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 GRAMD1AQ96CP6 724 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 P2RY11Q96G91 374 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 C8orf48Q96LL4 319 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 SYT15Q9BQS2 421 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 DDX19AQ9NUU7 478 aaKnown RBP11.91□□□□□ -0.5
GPN3-208ENST00000550974 AGAP1Q9UPQ3 857 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 NCKAP1Q9Y2A7 1128 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 SNX9Q9Y5X1 595 aa11.91□□□□□ -0.5
GPN3-208ENST00000550974 E9PMD0 336 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 GABRDO14764 452 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 HNRNPDLO14979 420 aaKnown RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 DTNBO60941 627 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 ITGA2BP08514 1039 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 MUTP22033 750 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 LMO2P25791 158 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 SLC5A2P31639 672 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 KRT2P35908 639 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 MLLT3P42568 568 aaPredicted RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 CD97P48960 835 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 ZBTB16Q05516 673 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 E2F5Q15329 346 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 JAMLQ86YT9 394 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 IFI44Q8TCB0 444 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 MOCOSQ96EN8 888 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 UCKL1Q9NWZ5 548 aa11.9□□□□□ -0.5
GPN3-208ENST00000550974 LSM7Q9UK45 103 aaKnown RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
GPN3-208ENST00000550974 CSMD1Q96PZ7 3565 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 A0A0B4J269 797 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
GPN3-208ENST00000550974 ITGB3P05106 788 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 PDGFRBP09619 1106 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 OR52Z1P0C646 297 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 PLS3P13797 630 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 WT1P19544 449 aaPredicted RBP11.89□□□□□ -0.51
GPN3-208ENST00000550974 MCM7P33993 719 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 POLE2P56282 527 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 STK3Q13188 491 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 KCNJ12Q14500 433 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 MAPRE1Q15691 268 aaKnown RBP11.89□□□□□ -0.51
GPN3-208ENST00000550974 FNDC3BQ53EP0 1204 aaKnown RBP11.89□□□□□ -0.51
GPN3-208ENST00000550974 RINT1Q6NUQ1 792 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 BORAQ6PGQ7 559 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 HS2ST1Q7LGA3 356 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 NUP93Q8N1F7 819 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 FBXL16Q8N461 479 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 APOLD1Q96LR9 279 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms