RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 FOXJ1Q92949 421 aa22.75■■□□□ 1.23
SMARCC2-210ENST00000550519 PIWIL1Q96J94 861 aaKnown RBP22.75■■□□□ 1.23
SMARCC2-210ENST00000550519 ARID3AQ99856 593 aa22.75■■□□□ 1.23
SMARCC2-210ENST00000550519 MARCH2Q9P0N8 246 aa22.75■■□□□ 1.23
SMARCC2-210ENST00000550519 NEUROG3Q9Y4Z2 214 aa22.75■■□□□ 1.23
SMARCC2-210ENST00000550519 HYAL3O43820 417 aaPredicted RBP22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 CD59P13987 128 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 CD6P30203 668 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 IL12RB1P42701 662 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 SYCP2LQ5T4T6 812 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 PM20D1Q6GTS8 502 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 RGL4Q8IZJ4 473 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 CPXM2Q8N436 756 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 ANKRD52Q8NB46 1076 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 EEF2KMTQ96G04 330 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 MKRN2Q9H000 416 aaKnown RBP22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 GOLPH3LQ9H4A5 285 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 PRDM16Q9HAZ2 1276 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 ITM2CQ9NQX7 267 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 WSB2Q9NYS7 404 aaPredicted RBP22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 USP36Q9P275 1121 aaKnown RBP22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 SUSD2Q9UGT4 822 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 CEP192Q8TEP8 1941 aa22.74■■□□□ 1.23
SMARCC2-210ENST00000550519 GJB3O75712 270 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 ZNF202O95125 648 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 YWHAGP61981 247 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 FAM193AP78312 1265 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 WDR45BQ5MNZ6 344 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 DENND1CQ8IV53 801 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 FAM217AQ8IXS0 508 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 RBBP8NLQ8NC74 664 aaPredicted RBP22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 UCMAQ8WVF2 138 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 TATDN2Q93075 761 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 STRIP2Q9ULQ0 834 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 CLEC4EQ9ULY5 219 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 ASPMQ8IZT6 3477 aa22.73■■□□□ 1.23
SMARCC2-210ENST00000550519 FAM208BQ5VWN6 2430 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 SLC12A8A0AV02 714 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 STX10O60499 249 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 CYBBP04839 570 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 TKTL1P51854 596 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 SLC14A1Q13336 389 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 PLEKHG6Q3KR16 790 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 RSRC2Q7L4I2 434 aaKnown RBP22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 BHLHA9Q7RTU4 235 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 ANKS1BQ7Z6G8 1248 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 DNASE2BQ8WZ79 361 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 TOE1Q96GM8 510 aaKnown RBP22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 SLC2A11Q9BYW1 496 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 SCAND2PQ9GZW5 306 aaPredicted RBP22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 ELOVL2Q9NXB9 296 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 MSRB2Q9Y3D2 182 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 NFE2L3Q9Y4A8 694 aa22.72■■□□□ 1.23
SMARCC2-210ENST00000550519 ADAMTS9Q9P2N4 1935 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 H0Y626 953 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 CETN3O15182 167 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 TRIM16O95361 564 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 ZBED1O96006 694 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 EPB41P11171 864 aaKnown RBP22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 GNSP15586 552 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 MAOBP27338 520 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 SLC8A3P57103 927 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 HNRNPDQ14103 355 aaKnown RBP22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 ZNF234Q14588 700 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 EIF4HQ15056 248 aaKnown RBP22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 E2F5Q15329 346 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 TRIP4Q15650 581 aaPredicted RBP22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 TMPRSS6Q8IU80 811 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 SMYD4Q8IYR2 804 aaPredicted RBP22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 CADM4Q8NFZ8 388 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 PLD4Q96BZ4 506 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 COQ4Q9Y3A0 265 aa22.71■■□□□ 1.23
SMARCC2-210ENST00000550519 KCNJ18B7U540 433 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 TULP2O00295 520 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 TPMTP51580 245 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 CBWD6Q4V339 395 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 CBWD3Q5JTY5 395 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 CBWD5Q5RIA9 395 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 TMEM215Q68D42 235 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 DDI1Q8WTU0 396 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 GPR174Q9BXC1 333 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 ULBP1Q9BZM6 244 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 RALYQ9UKM9 306 aaKnown RBP22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 KLK13Q9UKR3 277 aa22.7■■□□□ 1.22
SMARCC2-210ENST00000550519 FAM221BA6H8Z2 402 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 XPO1O14980 1071 aaKnown RBP22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 SYNCRIPO60506 623 aaKnown RBP22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 IGLV3-19P01714 112 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 NCAM1P13591 858 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 COPAP53621 1224 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 PDE4CQ08493 712 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 NDRG1Q92597 394 aaKnown RBP22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 SIPA1Q96FS4 1042 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 ZDHHC5Q9C0B5 715 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 OLA1Q9NTK5 396 aaKnown RBP22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 TSPAN16Q9UKR8 245 aa22.69■■□□□ 1.22
SMARCC2-210ENST00000550519 A0A1B0GTW7 788 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 TIMM44O43615 452 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 SH3BP5O60239 455 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 PRKCHP24723 683 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms