RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	RNF40	O75150	1001 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	TULP3	O75386	442 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	FLT3	P36888	993 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	GABRB2	P47870	512 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	IRAK1	P51617	712 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	SEC13	P55735	322 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	BPIFB4	P59827	614 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	YWHAZ	P63104	245 aa	Known RBP	11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	CLEC16A	Q2KHT3	1053 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	ANO4	Q32M45	955 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	FAM133B	Q5BKY9	247 aa	Known RBP	11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	FYB2	Q5VWT5	728 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	RFWD3	Q6PCD5	774 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	FAM217A	Q8IXS0	508 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	TMEM35B	Q8NCS4	154 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	JOSD2	Q8TAC2	188 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	WFDC5	Q8TCV5	224 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	RNF139	Q8WU17	664 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	CD101	Q93033	1021 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	AGPAT1	Q99943	283 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	RBSN	Q9H1K0	784 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	TBC1D14	Q9P2M4	693 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	SNX10	Q9Y5X0	201 aa		11.69	□□□□□ -0.54
RAB5B-208	ENST00000550283	CACNA1H	O95180	2353 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	ATG2B	Q96BY7	2078 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	PRRT4	C9JH25	899 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	GOLGA6L19	H0YKK7	550 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SLC9A3R1	O14745	358 aa	Predicted RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	IRAK2	O43187	625 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	TRUB2	O95900	331 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	PENK	P01210	267 aa	Predicted RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	GYPC	P04921	128 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	PLEK	P08567	350 aa	Predicted RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	CISD3	P0C7P0	127 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	TYR	P14679	529 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	MMP8	P22894	467 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	GGCX	P38435	758 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	RPS9	P46781	194 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	TBX4	P57082	545 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	RNASE9	P60153	205 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	COG7	P83436	770 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SLC6A3	Q01959	620 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	DCAF6	Q58WW2	860 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SH3PXD2A	Q5TCZ1	1133 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	HGSNAT	Q68CP4	663 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SLC26A9	Q7LBE3	791 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	CACNA2D4	Q7Z3S7	1137 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	C1orf210	Q8IVY1	113 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	EMC1	Q8N766	993 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	KIAA1958	Q8N8K9	716 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	PLD4	Q96BZ4	506 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	ERLEC1	Q96DZ1	483 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	C11orf70	Q9BRQ4	267 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	MAGEB5	Q9BZ81	275 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	NUCKS1	Q9H1E3	243 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	PDCL3	Q9H2J4	239 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	POPDC2	Q9HBU9	364 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	OLA1	Q9NTK5	396 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	MARK1	Q9P0L2	795 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	COX16	Q9P0S2	106 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	TMEM59L	Q9UK28	342 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	STRIP2	Q9ULQ0	834 aa		11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	HBS1L	Q9Y450	684 aa	Known RBP	11.68	□□□□□ -0.54
RAB5B-208	ENST00000550283	TCRBV5S1A1T	A0A578	114 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283		K7ESF4	209 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	DDX3X	O00571	662 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	DAB1	O75553	588 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	LSM8	O95777	96 aa	Known RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	ADH1C	P00326	375 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	FILIP1L	Q4L180	1135 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	SMYD5	Q6GMV2	418 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	MON1B	Q7L1V2	547 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	BEND5	Q7L4P6	421 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	ERICH1	Q86X53	443 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	ZNF397	Q8NF99	534 aa	Predicted RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	CPLX3	Q8WVH0	158 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	OTUB2	Q96DC9	234 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	C18orf8	Q96DM3	657 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	ACOX2	Q99424	681 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	TBCB	Q99426	244 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	NELL2	Q99435	816 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	NPY6R	Q99463	290 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	BBS2	Q9BXC9	721 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	HAUS4	Q9H6D7	363 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	GRPEL1	Q9HAV7	217 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	PRMT8	Q9NR22	394 aa	Predicted RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	METTL5	Q9NRN9	209 aa	Known RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	PIGV	Q9NUD9	493 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	AIPL1	Q9NZN9	384 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	STOML2	Q9UJZ1	356 aa		11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	LSM7	Q9UK45	103 aa	Known RBP	11.67	□□□□□ -0.54
RAB5B-208	ENST00000550283	MRPS17	Q9Y2R5	130 aa	Known RBP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms