RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ZBED4O75132 1171 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 KRT38O76015 456 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 LBX1P52954 281 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 MEA1Q16626 185 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 CACHD1Q5VU97 1274 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 MPZL3Q6UWV2 235 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 DOK3Q7L591 496 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 CFAP52Q8N1V2 620 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 ADAMTS15Q8TE58 950 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 GOLGA1Q92805 767 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 GRAMD1AQ96CP6 724 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 ABHD16BQ9H3Z7 469 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 ORC3Q9UBD5 711 aaPredicted RBP6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 SHOC2Q9UQ13 582 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 DERAQ9Y315 318 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 CEMIPQ8WUJ3 1361 aa6.84□□□□□ -1.31
TGFBR1-208ENST00000550253 LAMB4A4D0S4 1761 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 NUP98P52948 1817 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 CCNT2O60583 730 aaKnown RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 RASAL1O95294 804 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 STARD3NLO95772 234 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ATXN1LP0C7T5 689 aaKnown RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 HSPA8P11142 646 aaKnown RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 AKT1P31749 480 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 DGKEP52429 567 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 CLNS1AP54105 237 aaKnown RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 NAP1L1P55209 391 aaKnown RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 KRT17Q04695 432 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 GPS1Q13098 491 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 NOMO2Q5JPE7 1267 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ATG16L1Q676U5 607 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 HAUS3Q68CZ6 603 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 KRT77Q7Z794 578 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 CNBD1Q8NA66 436 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ZMIZ2Q8NF64 920 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ZFP28Q8NHY6 868 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 BPIFB1Q8TDL5 484 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 MASTLQ96GX5 879 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 GPR20Q99678 358 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 EPC1Q9H2F5 836 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 PRDM13Q9H4Q3 707 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 VSX1Q9NZR4 365 aaPredicted RBP6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 VPS51Q9UID3 782 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 GPR34Q9UPC5 381 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 CNTN6Q9UQ52 1028 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 ZDHHC9Q9Y397 364 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 USP16Q9Y5T5 823 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 RNF123Q5XPI4 1314 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
TGFBR1-208ENST00000550253 PNMA6EA0A0J9YXQ4 647 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 MATN2O00339 956 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 PPP6R2O75170 966 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 SEMA7AO75326 666 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TAF5LO75529 589 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TMEM63AO94886 807 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 CYP1A1P04798 512 aaPredicted RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 ITGB1P05556 798 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 ZNF134P52741 427 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 LILRA4P59901 499 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 FHL3Q13643 280 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 RIN1Q13671 783 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TSTQ16762 297 aaKnown RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 KIF7Q2M1P5 1343 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TTC5Q8N0Z6 440 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TFAP2CQ92754 450 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 MBD6Q96DN6 1003 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 LRIG1Q96JA1 1093 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 PHACTR3Q96KR7 559 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 DIRC2Q96SL1 478 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TCF25Q9BQ70 676 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 NUDT16L1Q9BRJ7 211 aaKnown RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TRIM5Q9C035 493 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 EPB41L4BQ9H329 900 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 AGO3Q9H9G7 860 aaKnown RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 TBX20Q9UMR3 447 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 DNAJC16Q9Y2G8 782 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 KNSTRNQ9Y448 316 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 NR2E1Q9Y466 385 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 DLG5Q8TDM6 1919 aa6.82□□□□□ -1.32
TGFBR1-208ENST00000550253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 FAM90A20PA6NIJ5 464 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 FCER1AP12319 257 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 LRPAP1P30533 357 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CTCFP49711 727 aaPredicted RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CDK7P50613 346 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ANKRD1Q15327 319 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CCNG2Q16589 344 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 PTCHD3Q3KNS1 767 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 GALNTL6Q49A17 601 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CC2D1BQ5T0F9 858 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 TSHZ3Q63HK5 1081 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms