RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 CTNND2Q9UQB3 1225 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 RAXQ9Y2V3 346 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 HELZ2Q9BYK8 2649 aaKnown RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 CKAP5Q14008 2032 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 URB1O60287 2271 aaKnown RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 TP53BP1Q12888 1972 aaPredicted RBP16.33■□□□□ 0.21
TCHP-208ENST00000549550 A0A1B0GTW7 788 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 LRRC10BA6NIK2 292 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 MEI4A8MW99 385 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 GREM1O60565 184 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 TLR5O60602 858 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.2
TCHP-208ENST00000549550 CD6P30203 668 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 PGFP49763 221 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 MYL6P60660 151 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 TRPC3Q13507 836 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 PSMD6Q15008 389 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 BMT2Q1RMZ1 405 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 ZCCHC9Q8N567 271 aaKnown RBP16.33■□□□□ 0.2
TCHP-208ENST00000549550 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 SETD7Q8WTS6 366 aaKnown RBP16.33■□□□□ 0.2
TCHP-208ENST00000549550 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 SMYD3Q9H7B4 428 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 IL21RQ9HBE5 538 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 MARK1Q9P0L2 795 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 IMPACTQ9P2X3 320 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 SHROOM3Q8TF72 1996 aa16.33■□□□□ 0.2
TCHP-208ENST00000549550 GFRA2O00451 464 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 KALRNO60229 2985 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
TCHP-208ENST00000549550 TBX18O95935 607 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 SERPINC1P01008 464 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 NCAM1P13591 858 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 DGKGP49619 791 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 CDH8P55286 799 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 FANCCQ00597 558 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 CYP24A1Q07973 514 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 FILIP1LQ4L180 1135 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 KLHL10Q6JEL2 608 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 KNL1Q8NG31 2342 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 DNASE2BQ8WZ79 361 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 ZNF516Q92618 1163 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 BHMTQ93088 406 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 TOE1Q96GM8 510 aaKnown RBP16.32■□□□□ 0.2
TCHP-208ENST00000549550 LRIG1Q96JA1 1093 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 BBC3Q96PG8 261 aaPredicted RBP16.32■□□□□ 0.2
TCHP-208ENST00000549550 GPR174Q9BXC1 333 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 KLF16Q9BXK1 252 aaPredicted RBP16.32■□□□□ 0.2
TCHP-208ENST00000549550 MIR1-1HGQ9H1L0 117 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 COMMD8Q9NX08 183 aa16.32■□□□□ 0.2
TCHP-208ENST00000549550 CABIN1Q9Y6J0 2220 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 AP1G2O75843 785 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 TPM2P07951 284 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 ATICP31939 592 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 CYP2J2P51589 502 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 SNRPFP62306 86 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 EDRF1Q3B7T1 1238 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 FUT11Q495W5 492 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 EPM2AIP1Q7L775 607 aaPredicted RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 SMYD4Q8IYR2 804 aaPredicted RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 MED15Q96RN5 788 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 GAREM1Q9H706 876 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 PRDM16Q9HAZ2 1276 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 SLC39A2Q9NP94 309 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 TLR8Q9NR97 1041 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 WSB2Q9NYS7 404 aaPredicted RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 KIAA1522Q9P206 1035 aaPredicted RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 USP36Q9P275 1121 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 CGNQ9P2M7 1197 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 LIMA1Q9UHB6 759 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 LSM7Q9UK45 103 aaKnown RBP16.31■□□□□ 0.2
TCHP-208ENST00000549550 STON1Q9Y6Q2 735 aa16.31■□□□□ 0.2
TCHP-208ENST00000549550 NUMA1Q14980 2115 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 CLIC2O15247 247 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 CILPO75339 1184 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 BEST1O76090 585 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 CLSTN1O94985 981 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 CER1O95813 267 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 GNA14O95837 355 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 CISD3P0C7P0 127 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 UBASH3AP57075 661 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 STARD3Q14849 445 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 NFIL3Q16649 462 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 SCARA5Q6ZMJ2 495 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 TMPRSS7Q7RTY8 843 aa16.3■□□□□ 0.2
TCHP-208ENST00000549550 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
TCHP-208ENST00000549550 ZMIZ2Q8NF64 920 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms