RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ACTRT2Q8TDY3 377 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 JADE3Q92613 823 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 LHX5Q9H2C1 402 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 SPON1Q9HCB6 807 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 PNPOQ9NVS9 261 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 GPATCH2LQ9NWQ4 482 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ITGA11Q9UKX5 1188 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 PHF24Q9UPV7 400 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 PIK3R2O00459 728 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 KLHL2O95198 593 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 ITGAXP20702 1163 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 AP3M2P53677 418 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 TFDP2Q14188 446 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 CDO1Q16878 200 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 DUOXA2Q1HG44 320 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 FAM102AQ5T9C2 384 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-228ENST00000548938 TRNP1Q6NT89 227 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 GPC2Q8N158 579 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 CCDC33Q8N5R6 958 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 PLD5Q8N7P1 536 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 GSDMBQ8TAX9 411 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 DEPDC1BQ8WUY9 529 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 SLC7A3Q8WY07 619 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 FRMD8Q9BZ67 464 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-228ENST00000548938 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 HMGXB4Q9UGU5 601 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 LOC100653049A0A140TA62 436 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 SMIM31A0A1B0GVY4 71 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 CAPN8A6NHC0 703 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 H3BNX3 289 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 KRT34O76011 436 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 HMGCRP04035 888 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 OATP04181 439 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 ADORA2AP29274 412 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 ARRB2P32121 409 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 INHBCP55103 352 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 XIAPP98170 497 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 CBLBQ13191 982 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 N4BP2L1Q5TBK1 243 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-228ENST00000548938 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 XRRA1Q6P2D8 792 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 SDCCAG8Q86SQ7 713 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-228ENST00000548938 NCAPG2Q86XI2 1143 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
HDAC7-228ENST00000548938 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 RTP4Q96DX8 246 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 HIC2Q96JB3 615 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 MPP4Q96JB8 637 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 SIGLEC10Q96LC7 697 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 RNF157Q96PX1 679 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 GCNAQ96QF7 691 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 TWNKQ96RR1 684 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 MIS12Q9H081 205 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 ZNF112Q9UJU3 913 aa14.17□□□□□ -0.14
HDAC7-228ENST00000548938 MAFGO15525 162 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 GRIA1P42261 906 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 GABRB2P47870 512 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 IDH3AP50213 366 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 FOLH1Q04609 750 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 FAM47CQ5HY64 1035 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 PDPK2PQ6A1A2 396 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 FRMD7Q6ZUT3 714 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 PHTF2Q8N3S3 785 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 TFB1MQ8WVM0 346 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 PIWIL1Q96J94 861 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 WRNIP1Q96S55 665 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 ADPGKQ9BRR6 497 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 SIKE1Q9BRV8 207 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 LMCD1Q9NZU5 365 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 MED7O43513 233 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 METTL18O95568 372 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 SP2Q02086 613 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 TBL3Q12788 808 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 TTLL12Q14166 644 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 KRT81Q14533 505 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 TLR1Q15399 786 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 SMAD1Q15797 465 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 TMC7Q7Z402 723 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 PQLC3Q8N755 202 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 KCNN1Q92952 543 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 MCRS1Q96EZ8 462 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 DNAJC1Q96KC8 554 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 SORT1Q99523 831 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 EBNA1BP2Q99848 306 aaKnown RBP14.16□□□□□ -0.14
HDAC7-228ENST00000548938 INPP5FQ9Y2H2 1132 aa14.16□□□□□ -0.14
HDAC7-228ENST00000548938 ADCY3O60266 1144 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 GRAP2O75791 330 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ALDOAP04075 364 aaKnown RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ASLP04424 464 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 HOXC6P09630 235 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 IL4RP24394 825 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 MAGEA3P43357 314 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 MAGEA6P43360 314 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 SERPINB9P50453 376 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ZNF143P52747 638 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 MAP7Q14244 749 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms