RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 DCLRE1BQ9H816 532 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 ANGPTL2Q9UKU9 493 aa14.63□□□□□ -0.07
CACNB3-209ENST00000548860 RNF103O00237 685 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 LMO2P25791 158 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 PLEKHG4Q58EX7 1191 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 CHST12Q9NRB3 414 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 CNTNAP2Q9UHC6 1331 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 NFKBIEO00221 500 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 PEX1O43933 1283 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 HOXC6P09630 235 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 NELFEP18615 380 aaKnown RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 TGM2P21980 687 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 ABCD1P33897 745 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 VHLP40337 213 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 ASPAP45381 313 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 AP2B1P63010 937 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 CDK16Q00536 496 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 ZNF268Q14587 947 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 RPS6KA2Q15349 733 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 MYLK4Q86YV6 388 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 STKLD1Q8NE28 680 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 HDAC11Q96DB2 347 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 PCYT2Q99447 389 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 TMEM109Q9BVC6 243 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 TXNRD2Q9NNW7 524 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 CASTOR2A6NHX0 329 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 SEC24DO94855 1032 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 GNAT1P11488 350 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 NDUFV1P49821 464 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 COG7P83436 770 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 IYDQ6PHW0 289 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 UNC5AQ6ZN44 842 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 ZSCAN18Q8TBC5 510 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 ZNF518BQ9C0D4 1074 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
CACNB3-209ENST00000548860 CPSF3Q9UKF6 684 aaKnown RBP14.62□□□□□ -0.07
CACNB3-209ENST00000548860 APOEP02649 317 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 FGFR1P11362 822 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 ETFBP38117 255 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 BEX3Q00994 111 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 CRYMQ14894 314 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 FKBP1CQ5VVH2 108 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 ARMCX2Q7L311 632 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 OPTNQ96CV9 577 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 CDCA5Q96FF9 252 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 GCOM2Q9BZD3 368 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 TAS2R1Q9NYW7 299 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 MAFBQ9Y5Q3 323 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 SRRM3A6NNA2 597 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 RALGPS1Q5JS13 557 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 ZNF618Q5T7W0 954 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 RBM15BQ8NDT2 890 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 PCDH19Q8TAB3 1148 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 PDCD6IPQ8WUM4 868 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 TBCBQ99426 244 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 GPR20Q99678 358 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 NACA2Q9H009 215 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 WDR55Q9H6Y2 383 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 PCDH18Q9HCL0 1135 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 ARHGEF3Q9NR81 526 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 NMRK1Q9NWW6 199 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 DRG1Q9Y295 367 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 SCAMP3O14828 347 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 RECQL4O94761 1208 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 CXCR3P49682 368 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 CCNHP51946 323 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 ZNF143P52747 638 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 YWHAZP63104 245 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 BIRC2Q13490 618 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 OASLQ15646 514 aaKnown RBP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 SLC10A6Q3KNW5 377 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 LPCAT4Q643R3 524 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 LRRC74BQ6ZQY2 392 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 NUF2Q9BZD4 464 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 PRDM12Q9H4Q4 367 aa14.61□□□□□ -0.07
CACNB3-209ENST00000548860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.61□□□□□ -0.07
CACNB3-209ENST00000548860 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
CACNB3-209ENST00000548860 DPPA5A6NC42 116 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 GSC2O15499 205 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 LGALS2P05162 132 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 ACSBG2Q5FVE4 666 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 TP53INP2Q8IXH6 220 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 ICA1LQ8NDH6 482 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 NLGN2Q8NFZ4 835 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 FBXO27Q8NI29 283 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 PABPC5Q96DU9 382 aaKnown RBP14.6□□□□□ -0.07
CACNB3-209ENST00000548860 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 EIF2AQ9BY44 585 aaKnown RBP14.6□□□□□ -0.07
CACNB3-209ENST00000548860 SNCAIPQ9Y6H5 919 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 IL18RAPO95256 599 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 SLC1A6P48664 564 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 PRAMEP78395 509 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 CELF3Q5SZQ8 465 aaKnown RBP14.6□□□□□ -0.07
CACNB3-209ENST00000548860 C10orf82Q8WW14 230 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 BHMTQ93088 406 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 FSD1LQ9BXM9 530 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 NRDE2Q9H7Z3 1164 aa14.6□□□□□ -0.07
CACNB3-209ENST00000548860 MAP3K20Q9NYL2 800 aaKnown RBP14.6□□□□□ -0.07
CACNB3-209ENST00000548860 SPDYE5A6NIY4 337 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms