RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 KCNK3O14649 394 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 DDX3YO15523 660 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 THAP12O43422 761 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ITGB3P05106 788 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 CDH5P33151 784 aaPredicted RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 NSFP46459 744 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 YARSP54577 528 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 C1QBPQ07021 282 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ZBTB6Q15916 424 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ALKAL1Q6UXT8 129 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 MON1BQ7L1V2 547 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ZNF564Q8TBZ8 553 aaPredicted RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 LRRC3BQ96PB8 259 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 NUP85Q9BW27 656 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 CARD9Q9H257 536 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 DPP3Q9NY33 737 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 CNOT8Q9UFF9 292 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 TMEM59LQ9UK28 342 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 PACSIN2Q9UNF0 486 aaPredicted RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ALG6Q9Y672 507 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ADAMTS20P59510 1910 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 A0A1W2PRU2 124 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 ERLIN1O75477 346 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 KRT19P08727 400 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 CTXN3Q4LDR2 81 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 TMCO3Q6UWJ1 677 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 CYFIP2Q96F07 1278 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 PSMB7Q99436 277 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 LRRC3Q9BY71 257 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 GOLPH3Q9H4A6 298 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 CNTN3Q9P232 1028 aa20.91■□□□□ 0.94
CTDSP2-204ENST00000548823 NUP210Q8TEM1 1887 aaPredicted RBP20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 CLSTN1O94985 981 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 RHOXF2BP0C7M4 288 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 C2orf54Q08AI8 447 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 ITPRIPL2Q3MIP1 535 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 SOWAHCQ53LP3 525 aaPredicted RBP20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 XKR4Q5GH76 650 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 TMEM196Q5HYL7 178 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 NAA35Q5VZE5 725 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 RHOXF2Q9BQY4 288 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 LCMT1Q9UIC8 334 aa20.9■□□□□ 0.94
CTDSP2-204ENST00000548823 SMIM28A0A1B0GU29 152 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 PGRMC1O00264 195 aaKnown RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 CDX4O14627 284 aaPredicted RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 KHNYNO15037 678 aaKnown RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 MED7O43513 233 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 HYAL3O43820 417 aaPredicted RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 ZRANB2O95218 330 aaKnown RBP eCLIP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 CTNNA2P26232 953 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 SOX4Q06945 474 aaPredicted RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 TNK2Q07912 1038 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 GRSF1Q12849 480 aaKnown RBP eCLIP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 WDR72Q3MJ13 1102 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 ZNF280DQ6N043 979 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 CC2D1AQ6P1N0 951 aaPredicted RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 TMC8Q8IU68 726 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 UBL4BQ8N7F7 174 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 CD101Q93033 1021 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 HPDLQ96IR7 371 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 MS4A14Q96JA4 679 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 PNKPQ96T60 521 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 LHX5Q9H2C1 402 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 MRPL47Q9HD33 250 aaKnown RBP20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 ARFGAP3Q9NP61 516 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 AGAP1Q9UPQ3 857 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 PCNX2A6NKB5 2137 aa20.89■□□□□ 0.93
CTDSP2-204ENST00000548823 SCN1AP35498 2009 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 CCDC188H7C350 402 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 PODXLO00592 558 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 XPOTO43592 962 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 RRP9O43818 475 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 CEP104O60308 925 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 POLR2BP30876 1174 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 INCA1Q0VD86 236 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 PTP4A2Q12974 167 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 STXBP5Q5T5C0 1151 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 PLEKHA7Q6IQ23 1121 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 KIAA1211LQ6NV74 962 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 RNF19BQ6ZMZ0 732 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 LRRC52Q8N7C0 313 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 TMEM35BQ8NCS4 154 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 DEFB124Q8NES8 71 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 BEST2Q8NFU1 509 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 CPA5Q8WXQ8 436 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 NAP1L3Q99457 506 aaPredicted RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 SLC38A7Q9NVC3 462 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 NXF1Q9UBU9 619 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 KIAA1257Q9ULG3 409 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 YIPF1Q9Y548 306 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 SCINQ9Y6U3 715 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 ITPR1Q14643 2758 aa20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 ASCC3Q8N3C0 2202 aaKnown RBP20.88■□□□□ 0.93
CTDSP2-204ENST00000548823 CCDC66A2RUB6 948 aa20.87■□□□□ 0.93
CTDSP2-204ENST00000548823 DCLK1O15075 740 aa20.87■□□□□ 0.93
CTDSP2-204ENST00000548823 CILPO75339 1184 aa20.87■□□□□ 0.93
CTDSP2-204ENST00000548823 CALCAP01258 141 aa20.87■□□□□ 0.93
CTDSP2-204ENST00000548823 CALB1P05937 261 aa20.87■□□□□ 0.93
CTDSP2-204ENST00000548823 KCNE1P15382 129 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms