RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ITGB3P05106 788 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 NFICP08651 508 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 ZCCHC18P0CG32 403 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 TGFB3P10600 412 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 GRK2P25098 689 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC1A6P48664 564 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 COPAP53621 1224 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 PDE1BQ01064 536 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 INCA1Q0VD86 236 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 SEMA5AQ13591 1074 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 TEDDM1Q5T9Z0 273 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 STEAP4Q687X5 459 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 PGM2L1Q6PCE3 622 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 LCLAT1Q6UWP7 414 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 METTL7BQ6UX53 244 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 ZCCHC23Q6ZST2 131 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 TTC39CQ8N584 583 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 GSTCDQ8NEC7 633 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 OR6Y1Q8NGX8 325 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 CXorf38Q8TB03 319 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 ATP2A3Q93084 1043 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 ZNF778Q96MU6 729 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 CENPKQ9BS16 269 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 APOL6Q9BWW8 343 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 CDT1Q9H211 546 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 DNAJC28Q9NX36 388 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 DCDC2Q9UHG0 476 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 BARX2Q9UMQ3 279 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 DNAJC16Q9Y2G8 782 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 AFG3L2Q9Y4W6 797 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 MGAMO43451 1857 aa10.2□□□□□ -0.78
SMARCD1-205ENST00000548573 ARHGAP42A6NI28 874 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ITM2AO43736 263 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SIN3BO75182 1162 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 USP1O94782 785 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SERPINE1P05121 402 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 MLNP12872 115 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ALOX15P16050 662 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ZFXP17010 805 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 DESP17661 470 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 EDNRBP24530 442 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 GSTT1P30711 240 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NR2C2P49116 596 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC25A3Q00325 362 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ASPHQ12797 758 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 BIRC2Q13490 618 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NAB1Q13506 487 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 STILQ15468 1287 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NBPF12Q5TAG4 269 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SCYL2Q6P3W7 929 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 RAPH1Q70E73 1250 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ST13P4Q8IZP2 240 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 MPP5Q8N3R9 675 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 LRRC71Q8N4P6 559 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 CCDC33Q8N5R6 958 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC25A41Q8N5S1 370 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ACTRT2Q8TDY3 377 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 PIWIL1Q96J94 861 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NLRP4Q96MN2 994 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 DDX50Q9BQ39 737 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SNRNP25Q9BV90 132 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NRDE2Q9H7Z3 1164 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 GPATCH2LQ9NWQ4 482 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 TSPAN16Q9UKR8 245 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 EMCNQ9ULC0 261 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 MEI4A8MW99 385 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 LACTBL1A8MY62 500 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ZBTB42B2RXF5 422 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 B4GALT5O43286 388 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 PLIN3O60664 434 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 RNASEH1O60930 286 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 AP1G2O75843 785 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 EGFRP00533 1210 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SDC4P31431 198 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 IRX4P78413 519 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NIPAL4Q0D2K0 466 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 CA9Q16790 459 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 INSCQ1MX18 579 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 N4BP2L1Q5TBK1 243 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 MAP1SQ66K74 1059 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 DPY19L2Q6NUT2 758 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 RASSF3Q86WH2 238 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 PPP4R1Q8TF05 950 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 CDKL2Q92772 493 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 CMTM5Q96DZ9 223 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 TRIM56Q9BRZ2 755 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SPATA16Q9BXB7 569 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 KLHL4Q9C0H6 718 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms