RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 BEND2Q8NDZ0 799 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 SLC22A17Q8WUG5 538 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 HERVK_113Q902F9 699 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 LARP4BQ92615 738 aaKnown RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 USP13Q92995 863 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 KAZALD1Q96I82 304 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 ZSCAN31Q96LW9 406 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 TRAPPC9Q96Q05 1148 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 DPCDQ9BVM2 203 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 RASSF1Q9NS23 344 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTCH1-216ENST00000548379 MYRFQ9Y2G1 1151 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 POGZQ7Z3K3 1410 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 PTPRMP28827 1452 aa4.68□□□□□ -1.66
PTCH1-216ENST00000548379 HMX3A6NHT5 357 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SLC38A8A6NNN8 435 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 LINC00473A8K010 186 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 KIF28PB7ZC32 967 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 NPIPB8E9PQR5 432 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 AP4M1O00189 453 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 TMPRSS11DO60235 418 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ZNF202O95125 648 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MBPP02686 304 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 CYP21A2P08686 494 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MYCLP12524 364 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 KRT4P19013 534 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 DRD1P21728 446 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MMP8P22894 467 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MRPS35P82673 323 aaKnown RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 FAM187BQ17R55 369 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ADCK5Q3MIX3 580 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 GALNTL6Q49A17 601 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 RINLQ6ZS11 566 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ZNF627Q7L945 461 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 CPOQ8IVL8 374 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SFTPA1Q8IWL2 248 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SIRT6Q8N6T7 355 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ACTRT2Q8TDY3 377 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SLC9A6Q92581 669 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 PRR11Q96HE9 360 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 VPS50Q96JG6 964 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 PYM1Q9BRP8 204 aaKnown RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MECRQ9BV79 373 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MAF1Q9H063 256 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ELAC1Q9H777 363 aaKnown RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SAP30LQ9HAJ7 183 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 CYP4F11Q9HBI6 524 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 VPS45Q9NRW7 570 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 GAR1Q9NY12 217 aaKnown RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 NDUFAF4Q9P032 175 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 SEMA5BQ9P283 1151 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 AMFRQ9UKV5 643 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-216ENST00000548379 KIAA0556O60303 1618 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 MAP3K4Q9Y6R4 1608 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 LMTK3Q96Q04 1460 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 ARAP3Q8WWN8 1544 aa4.67□□□□□ -1.66
PTCH1-216ENST00000548379 CCDC187A0A096LP49 1063 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 M0QYT0 321 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 NKX2-8O15522 239 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 CA12O43570 354 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 TFRCP02786 760 aaKnown RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 TNFRSF1AP19438 455 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 CYP2C18P33260 490 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 MAPK9P45984 424 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 MCM2P49736 904 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 DIO1P49895 249 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 HSPA2P54652 639 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 PDE1AP54750 535 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 FAM3BP58499 235 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 ACTR2P61160 394 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 SF3A3Q12874 501 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 AAK1Q2M2I8 961 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 TBC1D25Q3MII6 688 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 AARS2Q5JTZ9 985 aaKnown RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 C16orf89Q6UX73 402 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 MMS22LQ6ZRQ5 1243 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 RRAGAQ7L523 313 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 LRRTM4Q86VH4 590 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 ABHD11Q8NFV4 315 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 PNISRQ8TF01 805 aaKnown RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 GLMPQ8WWB7 406 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 CPT1BQ92523 772 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 RUBCNQ92622 972 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 EDC3Q96F86 508 aaKnown RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 BBC3Q96PG8 261 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 SNX18Q96RF0 628 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 TOR3AQ9H497 397 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 TAF1DQ9H5J8 278 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-216ENST00000548379 MGAT4CQ9UBM8 478 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 ADAMTS5Q9UNA0 930 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 LZTS1Q9Y250 596 aa4.66□□□□□ -1.66
PTCH1-216ENST00000548379 ZCCHC11Q5TAX3 1644 aaKnown RBP4.65□□□□□ -1.66
PTCH1-216ENST00000548379 TSPOAP1O95153 1857 aa4.65□□□□□ -1.66
PTCH1-216ENST00000548379 NEO1Q92859 1461 aa4.65□□□□□ -1.66
PTCH1-216ENST00000548379 B8ZZF3 427 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms