RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PLK2Q9NYY3 685 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 A0A0A0MRY4 1105 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 CACNG3O60359 315 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 HSF2BPO75031 334 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 GRAP2O75791 330 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 APODP05090 189 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 GRIA2P42262 883 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 GABRB2P47870 512 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 NOMO3P69849 1222 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC6A3Q01959 620 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 RING1Q06587 406 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 ZNF528Q3MIS6 628 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 DCAF6Q58WW2 860 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 NAA35Q5VZE5 725 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 TOGARAM2Q6ZUX3 1019 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 ZDHHC17Q8IUH5 632 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 DEFB106AQ8N104 65 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 CPXM2Q8N436 756 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 C18orf8Q96DM3 657 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 FCRL2Q96LA5 508 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 SERPINB11Q96P15 392 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC2A13Q96QE2 648 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 XPO6Q96QU8 1125 aaKnown RBP19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 DEC1Q9P2X7 70 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 STOML2Q9UJZ1 356 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 TLR6Q9Y2C9 796 aa19.51■□□□□ 0.71
PRPF40B-206ENST00000547764 ANTXRLA6NF34 631 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 CHURC1-FNTBB4DL54 471 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 TRIM24O15164 1050 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 ATG13O75143 517 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 LATS1O95835 1130 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 TRUB2O95900 331 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 PENKP01210 267 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 CYP1A1P04798 512 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 SEC13P55735 322 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 PITX1P78337 314 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 NNTQ13423 1086 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 C2CD6Q53TS8 623 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 FYB2Q5VWT5 728 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 NUGGCQ68CJ6 796 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC26A9Q7LBE3 791 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 UNC45BQ8IWX7 931 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 RPLP0P6Q8NHW5 317 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 BAP1Q92560 729 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC39A13Q96H72 371 aa19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 DNAJC17Q9NVM6 304 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-206ENST00000547764 PAPSS2O95340 614 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 IGLV3-25P01717 112 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 TDGF1P13385 188 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 UBASH3AP57075 661 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 PPP2R5DQ14738 602 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 ADGRF1Q5T601 910 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 GRAMD4Q6IC98 578 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 LRSAM1Q6UWE0 723 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 XYLT1Q86Y38 959 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 ZNF397Q8NF99 534 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 CCDC26Q8TAB7 109 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 USP33Q8TEY7 942 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 PCDHB18PQ96TA0 734 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 TSPY26PQ9H489 355 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 POLR3BQ9NW08 1133 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 MYO6Q9UM54 1294 aa19.49■□□□□ 0.71
PRPF40B-206ENST00000547764 TBC1D3BA6NDS4 549 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 K7ESF4 209 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 GFRA2O00451 464 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 IRAK2O43187 625 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 CYBBP04839 570 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 FERP16591 822 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 NBL1P41271 181 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 TNFRSF4P43489 277 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC11A2P49281 568 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 CDK17Q00537 523 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 EIF4EBP2Q13542 120 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 PREPLQ4J6C6 727 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 C2orf27AQ580R0 203 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 TRIM72Q6ZMU5 477 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 TERB1Q8NA31 727 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 NELL1Q92832 810 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 AZIN2Q96A70 460 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 FBXO10Q9UK96 956 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 R4GN57 208 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 KIAA1549LQ6ZVL6 1849 aa19.48■□□□□ 0.71
PRPF40B-206ENST00000547764 GOLGA6L7A0A1B0GV03 622 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 LRRC53A6NM62 1247 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 ACSL4O60488 711 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 TSPAN3O60637 253 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 DAB1O75553 588 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 CISD3P0C7P0 127 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 CCDC172P0C7W6 258 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 CHRM1P11229 460 aaPredicted RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 UNGP13051 313 aaPredicted RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 HOXC13P31276 330 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 SCNN1AP37088 669 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 DGKGP49619 791 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 RNASE9P60153 205 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 MPPE1Q53F39 396 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 FAM133BQ5BKY9 247 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 ZC3H12AQ5D1E8 599 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms