RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PLOD3O60568 738 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 DNAJB5O75953 348 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 USP1O94782 785 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 UNC5CO95185 931 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 GLP2RO95838 553 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 GJB1P08034 283 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 RARBP10826 455 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 EGR1P18146 543 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 RXRAP19793 462 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 PTGER1P34995 402 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 HOXD12P35452 270 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 PHKA1P46020 1223 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 PRKAA2P54646 552 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ALDH18A1P54886 795 aaKnown RBP4.75□□□□□ -1.65
SCAF11-210ENST00000547654 RPS7P62081 194 aaKnown RBP4.75□□□□□ -1.65
SCAF11-210ENST00000547654 CUL4BQ13620 913 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 MEA1Q16626 185 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 MAPKAPK3Q16644 382 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 PREPLQ4J6C6 727 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-210ENST00000547654 CCDC184Q52MB2 194 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 MTX3Q5HYI7 312 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 DCAF12L1Q5VU92 463 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ARMC3Q5W041 872 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 TAPT1Q6NXT6 567 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 CCDC129Q6ZRS4 1044 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 KRT28Q7Z3Y7 464 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 CLNKQ7Z7G1 428 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 KRT73Q86Y46 540 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 HERC6Q8IVU3 1022 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 DNAJC5GQ8N7S2 189 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 LSMEM1Q8N8F7 131 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ANKRD52Q8NB46 1076 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 SLC17A8Q8NDX2 589 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 OR56A3Q8NH54 315 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 CEP70Q8NHQ1 597 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 TDRD7Q8NHU6 1098 aaKnown RBP4.75□□□□□ -1.65
SCAF11-210ENST00000547654 MYCBPAPQ8TBZ2 947 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 RFFLQ8WZ73 363 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 RFKQ969G6 155 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ZUFSPQ96AP4 578 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 OSBPL9Q96SU4 736 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 GDF15Q99988 308 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 GPR63Q9BZJ6 419 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 PCDHAC1Q9H158 963 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 SMOC2Q9H3U7 446 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 SH3GLB2Q9NR46 395 aa4.75□□□□□ -1.65
SCAF11-210ENST00000547654 SCAF8Q9UPN6 1271 aaKnown RBP4.75□□□□□ -1.65
SCAF11-210ENST00000547654 ZNF804BA4D1E1 1349 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ADGRA2Q96PE1 1338 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 SYNDIG1LA6NDD5 238 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TMEM233B4DJY2 109 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 RAB27BO00194 218 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TK1P04183 234 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 A1BGP04217 495 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 GRPP07492 148 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 CHRM2P08172 466 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 SLC3A2P08195 630 aaKnown RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 HNRNPA1P09651 372 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 GYS1P13807 737 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 JUPP14923 745 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PPP3CBP16298 524 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 CHMP24386 653 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ACVR2AP27037 513 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 SLC11A2P49281 568 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 CASP6P55212 293 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ARF3P61204 181 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ARF1P84077 181 aaKnown RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 CHRNDQ07001 517 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 SLC29A2Q14542 456 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PSMD6Q15008 389 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TXNRD1Q16881 649 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 C1QTNF12Q5T7M4 302 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 MAP3K21Q5TCX8 1036 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 FAM205BPQ63HN1 556 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 HAUS3Q68CZ6 603 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TAF2Q6P1X5 1199 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 CRTC1Q6UUV9 634 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 USP49Q70CQ1 688 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ENOSF1Q7L5Y1 443 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 SLC44A2Q8IWA5 706 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TMEM57Q8N5G2 664 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 OR6Y1Q8NGX8 325 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ADAMTS15Q8TE58 950 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ST8SIA4Q92187 359 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 GOLGA1Q92805 767 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PGBD1Q96JS3 809 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 FCRL4Q96PJ5 515 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PPP1R9BQ96SB3 815 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 IMPG2Q9BZV3 1241 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 AMBRA1Q9C0C7 1298 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 MS4A7Q9GZW8 240 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PAIP1Q9H074 479 aaKnown RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ALDH8A1Q9H2A2 487 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PABPC3Q9H361 631 aaKnown RBP4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PRDM8Q9NQV8 689 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 FLRT1Q9NZU1 646 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 ADAM21Q9UKJ8 722 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms