RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PIK3R2O00459 728 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 KCNK5O95279 499 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 PAEPP09466 180 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 LCP1P13796 627 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 ITPKAP23677 461 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.17
CPSF6-204ENST00000547486 RGS7P49802 495 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 STX17P56962 302 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 YWHAEP62258 255 aaKnown RBP13.96□□□□□ -0.17
CPSF6-204ENST00000547486 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 PMF1Q6P1K2 205 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 RRAGAQ7L523 313 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 SYT12Q8IV01 421 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 ARHGEF19Q8IW93 802 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 FAM217AQ8IXS0 508 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 PPM1KQ8N3J5 372 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 CPXM2Q8N436 756 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 RBBP8NLQ8NC74 664 aaPredicted RBP13.96□□□□□ -0.17
CPSF6-204ENST00000547486 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 MRGPRX1Q96LB2 322 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 NT5C1BQ96P26 610 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 CTNND2Q9UQB3 1225 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 STON1Q9Y6Q2 735 aa13.96□□□□□ -0.17
CPSF6-204ENST00000547486 MYO18AQ92614 2054 aaKnown RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 GFRA2O00451 464 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 GIPC1O14908 333 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 TSPAN3O60637 253 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 BRD2P25440 801 aaKnown RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 IL12RB1P42701 662 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 DAOAP59103 153 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 RPL6Q02878 288 aaKnown RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 ENPP2Q13822 863 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 CNGA2Q16280 664 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 TRIM61Q5EBN2 209 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 LYSMD4Q5XG99 296 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 TMEM215Q68D42 235 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 SLC41A1Q8IVJ1 513 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 TRIM59Q8IWR1 403 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 SCML4Q8N228 414 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 CLEC4CQ8WTT0 213 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 SORCS1Q8WY21 1168 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 PLD4Q96BZ4 506 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 IPO9Q96P70 1041 aaKnown RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 TMEM9BQ9NQ34 198 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 FSCN3Q9NQT6 498 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 CNGB3Q9NQW8 809 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 CYP8B1Q9UNU6 501 aa13.95□□□□□ -0.18
CPSF6-204ENST00000547486 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF6-204ENST00000547486 AP5Z1O43299 807 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 CYBBP04839 570 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 PMLP29590 882 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 PPP1R2P41236 205 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 ZNF132P52740 706 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 ZNF33AQ06730 810 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 FUT11Q495W5 492 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 PEAR1Q5VY43 1037 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 SLC36A4Q6YBV0 504 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 RNF139Q8WU17 664 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 KREMEN1Q96MU8 473 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 SRRTQ9BXP5 876 aaKnown RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 ELOVL2Q9NXB9 296 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 STOML2Q9UJZ1 356 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 HBS1LQ9Y450 684 aaKnown RBP13.94□□□□□ -0.18
CPSF6-204ENST00000547486 THADAQ6YHU6 1953 aa13.94□□□□□ -0.18
CPSF6-204ENST00000547486 GOLGA6L7A0A1B0GV03 622 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 P4HA2O15460 535 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
CPSF6-204ENST00000547486 ZNF217O75362 1048 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 FYNP06241 537 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
CPSF6-204ENST00000547486 HARS2P49590 506 aaKnown RBP13.93□□□□□ -0.18
CPSF6-204ENST00000547486 SGSHP51688 502 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 MARSP56192 900 aaKnown RBP13.93□□□□□ -0.18
CPSF6-204ENST00000547486 SH3PXD2AQ5TCZ1 1133 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 SLC23A3Q6PIS1 610 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 SLC2A11Q9BYW1 496 aa13.93□□□□□ -0.18
CPSF6-204ENST00000547486 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 M0QYV0 167 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ENGP17813 658 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 PRKCHP24723 683 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 HLA-FP30511 346 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 MAPK8P45983 427 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 NOVA1P51513 510 aaKnown RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 GCNT1Q02742 428 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms