RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 HOXC11O43248 304 aaPredicted RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 RTN2O75298 545 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SLC2A3P11169 496 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SLC11A2P49281 568 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 GAD2Q05329 585 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 MTA1Q13330 715 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 EIF4EBP2Q13542 120 aaPredicted RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 LY6G5CQ5SRR4 150 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 CWF19L1Q69YN2 538 aaKnown RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 ASTLQ6HA08 431 aaPredicted RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 CPXM2Q8N436 756 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 ADAM32Q8TC27 787 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 NT5C3BQ969T7 300 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 FCRL2Q96LA5 508 aaPredicted RBP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 NPY6RQ99463 290 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 LRFN3Q9BTN0 628 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 FAM204AQ9H8W3 233 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC38-203ENST00000546803 DDIT4Q9NX09 232 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 TAS2R14Q9NYV8 317 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 MARK1Q9P0L2 795 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 ARHGAP20Q9P2F6 1191 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 ADAMTS1Q9UHI8 967 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 STOML2Q9UJZ1 356 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SIT1Q9Y3P8 196 aa17.5■□□□□ 0.39
CCDC38-203ENST00000546803 SIGLEC16A6NMB1 481 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 FAM170BA6NMN3 283 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 TRDMT1O14717 391 aaKnown RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 F9P00740 461 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 APOEP02649 317 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 FTLP02792 175 aaPredicted RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 ADH5P11766 374 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 KRT3P12035 628 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 AOC1P19801 751 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 CD72P21854 359 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 PITX1P78337 314 aaPredicted RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 UBXN2BQ14CS0 331 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 SLC25A52Q3SY17 297 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 ADGRF1Q5T601 910 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 TMEM25Q86YD3 366 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 FAM217AQ8IXS0 508 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 PJA1Q8NG27 643 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 TRIM11Q96F44 468 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 PGAP3Q96FM1 320 aaPredicted RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 DDX50Q9BQ39 737 aaKnown RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 IRX2Q9BZI1 471 aaPredicted RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 METTL5Q9NRN9 209 aaKnown RBP17.49■□□□□ 0.39
CCDC38-203ENST00000546803 SLC12A6Q9UHW9 1150 aa17.49■□□□□ 0.39
CCDC38-203ENST00000546803 SSU72P8A0A1W2PR75 194 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 TMCO5BA8MYB1 307 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 M0QYT0 321 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 PLEKP08567 350 aaPredicted RBP17.48■□□□□ 0.39
CCDC38-203ENST00000546803 MYBL1P10243 752 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 TARSP26639 723 aaKnown RBP17.48■□□□□ 0.39
CCDC38-203ENST00000546803 CCR1P32246 355 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 FLT3P36888 993 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 EIF2DP41214 584 aaKnown RBP17.48■□□□□ 0.39
CCDC38-203ENST00000546803 ADKP55263 362 aaKnown RBP17.48■□□□□ 0.39
CCDC38-203ENST00000546803 PPP2R5DQ14738 602 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 DNAJC24Q6P3W2 148 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 WDR59Q6PJI9 974 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 TXNDC11Q6PKC3 985 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 PHLDB2Q86SQ0 1253 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 CD101Q93033 1021 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 CHFRQ96EP1 664 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 P2RY13Q9BPV8 354 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 NDRG2Q9UN36 371 aaKnown RBP17.48■□□□□ 0.39
CCDC38-203ENST00000546803 PAXBP1Q9Y5B6 917 aa17.48■□□□□ 0.39
CCDC38-203ENST00000546803 TCRBV5S1A1TA0A578 114 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ANKRD62A6NC57 917 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 C2CD4BA6NLJ0 364 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ACSL4O60488 711 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 CYBBP04839 570 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 PDGFRAP16234 1089 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 RRM1P23921 792 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 MAGEA9P43362 315 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 SULT1E1P49888 294 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 GRSF1Q12849 480 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 NME3Q13232 169 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 PON2Q15165 354 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 GAB4Q2WGN9 574 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ANO4Q32M45 955 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 PREPLQ4J6C6 727 aaPredicted RBP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 TMEM196Q5HYL7 178 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 TPGS1Q6ZTW0 290 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 SND1Q7KZF4 910 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ZNF687Q8N1G0 1237 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 ATP6V0D2Q8N8Y2 350 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 RNF34Q969K3 372 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 BTN2A3PQ96KV6 586 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 BBS2Q9BXC9 721 aa17.47■□□□□ 0.39
CCDC38-203ENST00000546803 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms