RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RARBP10826 455 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 EPHA3P29320 983 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 SKIV2L2P42285 1042 aaKnown RBP15.14■□□□□ 0.01
HOXC11-202ENST00000546378 NME3Q13232 169 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 CNGA3Q16281 694 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 C10orf107Q8IVU9 208 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 C4orf19Q8IY42 314 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 GORASP1Q9BQQ3 440 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ACAD9Q9H845 621 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PREBQ9HCU5 417 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 SLC24A2Q9UI40 661 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PSAT1Q9Y617 370 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PLA2G6O60733 806 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 CXCR3P49682 368 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 C6orf52Q5T4I8 152 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ACOT1Q86TX2 421 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 LCA5Q86VQ0 697 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PTCD3Q96EY7 689 aaKnown RBP15.14■□□□□ 0.01
HOXC11-202ENST00000546378 AVENQ9NQS1 362 aaPredicted RBP15.14■□□□□ 0.01
HOXC11-202ENST00000546378 BTBD7Q9P203 1132 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PPP2R3BQ9Y5P8 575 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 AGRPO00253 132 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 TPP1O14773 563 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 HSD17B4P51659 736 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 USP46P62068 366 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 CCDC142Q17RM4 750 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ATG16L1Q676U5 607 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ADGRD1Q6QNK2 874 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 SLC26A11Q86WA9 606 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 CLEC4CQ8WTT0 213 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 PEBP4Q96S96 227 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 TAGLN3Q9UI15 199 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 ADAMTS6Q9UKP5 1117 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 FNDC3AQ9Y2H6 1198 aaKnown RBP15.14■□□□□ 0.01
HOXC11-202ENST00000546378 METTL18O95568 372 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 TNNC2P02585 160 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 PMLP29590 882 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 GALK1P51570 392 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 JAK3P52333 1124 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 TBL3Q12788 808 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 DUOXA2Q1HG44 320 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 TMEM259Q4ZIN3 620 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 RBM44Q6ZP01 1051 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 ARHGAP22Q7Z5H3 698 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 ERO1BQ86YB8 467 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 CENPKQ9BS16 269 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 STRA6Q9BX79 667 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 STX18Q9P2W9 335 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 NPTXRO95502 500 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 FESP07332 822 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 CCND2P30279 289 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 POLR2BP30876 1174 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 PIGHQ14442 188 aaPredicted RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 EFHC1Q5JVL4 640 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 TP53INP2Q8IXH6 220 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 GALNT15Q8N3T1 639 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 MCPH1Q8NEM0 835 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 OR6Y1Q8NGX8 325 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 NSUN6Q8TEA1 469 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 COPS5Q92905 334 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 OMDQ99983 421 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 NUF2Q9BZD4 464 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 TSR3Q9UJK0 312 aaKnown RBP15.13■□□□□ 0.01
HOXC11-202ENST00000546378 HES2Q9Y543 173 aa15.13■□□□□ 0.01
HOXC11-202ENST00000546378 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 NFICP08651 508 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 MGAT1P26572 445 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 PLK1P53350 603 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 COPAP53621 1224 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 TTC39BQ5VTQ0 682 aaPredicted RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 USP50Q70EL3 339 aaPredicted RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 NAT8LQ8N9F0 302 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 KRT38O76015 456 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 KRT7P08729 469 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 MUTP22033 750 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 YWHAZP63104 245 aaKnown RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 SPDYAQ5MJ70 313 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 PCDH20Q8N6Y1 951 aaKnown RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 FAM172AQ8WUF8 416 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 PIF1Q9H611 641 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 PRRC2BQ5JSZ5 2229 aaKnown RBP15.12■□□□□ 0.01
HOXC11-202ENST00000546378 SLC1A6P48664 564 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 CCDC15Q0P6D6 951 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 SH2D4BQ5SQS7 431 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 NAT16Q8N8M0 369 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 KLC2Q9H0B6 622 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 CAAP1Q9H8G2 361 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms