RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	SNX31	Q8N9S9	440 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	RDH11	Q8TC12	318 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	RAB2B	Q8WUD1	216 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	LENG9	Q96B70	501 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	ASB9	Q96DX5	294 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	RTP4	Q96DX8	246 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	BTBD6	Q96KE9	485 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	PWWP2A	Q96N64	755 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	VRTN	Q9H8Y1	702 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.48	□□□□□ -0.73
UBC-213	ENST00000546120	GINM1	Q9NU53	330 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	COPG2	Q9UBF2	871 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	ADAM28	Q9UKQ2	775 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	ZNRF3	Q9ULT6	936 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	ERVK-11	Q9UQG0	969 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	CARD8	Q9Y2G2	431 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	ZBTB1	Q9Y2K1	713 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	SCN4A	P35499	1836 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	NUP98	P52948	1817 aa		10.48	□□□□□ -0.73
UBC-213	ENST00000546120	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.48	□□□□□ -0.73
UBC-213	ENST00000546120	NHS	Q6T4R5	1651 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	ISPD	A4D126	451 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	LRRIQ4	A6NIV6	560 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	SAC3D1	A6NKF1	404 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PSMD12	O00232	456 aa	Predicted RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	RNF103	O00237	685 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	MEIS2	O14770	477 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	MSH4	O15457	936 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	TPD52L2	O43399	206 aa	Known RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PSMD10	O75832	226 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GSTT2	P0CG29	244 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GSTT2B	P0CG30	244 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	MLN	P12872	115 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	MYF6	P23409	242 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PRDX5	P30044	214 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	SLC7A1	P30825	629 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GNL1	P36915	607 aa	Predicted RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GARS	P41250	739 aa	Known RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GSS	P48637	474 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	EIF2B2	P49770	351 aa	Known RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	CLDN10	P78369	228 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	MPP1	Q00013	466 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	RHD	Q02161	417 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	TMEM62	Q0P6H9	643 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	KLF10	Q13118	480 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	STX5	Q13190	355 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	DPYSL3	Q14195	570 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PTK2B	Q14289	1009 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	FASTKD3	Q14CZ7	662 aa	Known RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	UBE2S	Q16763	222 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	FASTKD1	Q53R41	847 aa	Known RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	AGAP7P	Q5VUJ5	663 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	TTC23L	Q6PF05	361 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	EPGN	Q6UW88	154 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	RFX8	Q6ZV50	586 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PRUNE1	Q86TP1	453 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	ITIH5	Q86UX2	942 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	ANKMY2	Q8IV38	441 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	CTAGE3P	Q8IX95	158 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	ZNF280C	Q8ND82	737 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	BEST2	Q8NFU1	509 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GSDMB	Q8TAX9	411 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	DHRS1	Q96LJ7	313 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	NSMCE3	Q96MG7	304 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	GBA3	Q9H227	469 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	RMND5A	Q9H871	391 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	RSAD1	Q9HA92	442 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	PRDM11	Q9NQV5	511 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	SLC38A7	Q9NVC3	462 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	NYAP2	Q9P242	653 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	SERPINB13	Q9UIV8	391 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	DSE	Q9UL01	958 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	AGTPBP1	Q9UPW5	1226 aa		10.47	□□□□□ -0.73
UBC-213	ENST00000546120	COL5A2	P05997	1499 aa	Predicted RBP	10.47	□□□□□ -0.73
UBC-213	ENST00000546120	FAM159B	A6NKW6	160 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	BOLA2-SMG1P6	H3BVE0	249 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120		K7ENM7	598 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	MEIS1	O00470	390 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	RGS13	O14921	159 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	PAPSS1	O43252	624 aa	Predicted RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	ATMIN	O43313	823 aa	Predicted RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	DEAF1	O75398	565 aa	Predicted RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	ZBTB11	O95625	1053 aa	Predicted RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	APOE	P02649	317 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	MYL3	P08590	195 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	HSPA1A	P0DMV8	641 aa	Known RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	HSPA1B	P0DMV9	641 aa	Known RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	PABPC1	P11940	636 aa	Known RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	CCNA2	P20248	432 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	RPL22	P35268	128 aa	Known RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	SERPINB5	P36952	375 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	ELK3	P41970	407 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	ABCE1	P61221	599 aa	Known RBP	10.46	□□□□□ -0.73
UBC-213	ENST00000546120	YWHAG	P61981	247 aa	Known RBP eCLIP	10.46	□□□□□ -0.73	8e-9	■□□□□ 11.2
UBC-213	ENST00000546120	NOMO3	P69849	1222 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	GABPA	Q06546	454 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	ART3	Q13508	389 aa		10.46	□□□□□ -0.73
UBC-213	ENST00000546120	IKBKE	Q14164	716 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms