RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 GALNT4Q8N4A0 578 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 APPL2Q8NEU8 664 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SLCO2A1Q92959 643 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 FGD4Q96M96 766 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 BTBD10Q9BSF8 475 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 ZNF358Q9NW07 568 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 GRID1Q9ULK0 1009 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 DNAJC16Q9Y2G8 782 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SPECC1L-ADORA2AF8WAN1 911 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PAPSS1O43252 624 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 RECQL4O94761 1208 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 LGALS2P05162 132 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SNRPAP09012 282 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 CDKN2BP42772 138 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 TUBP50607 506 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 POU6F1Q14863 301 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 RASA2Q15283 850 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 TAF12Q16514 161 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PTAR1Q7Z6K3 402 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 C10orf82Q8WW14 230 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 TMA16Q96EY4 203 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PRR11Q96HE9 360 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 EIF2AQ9BY44 585 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 CADM1Q9BY67 442 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PCDH9Q9HC56 1237 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SARS2Q9NP81 518 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 GPRC5DQ9NZD1 345 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 FCHO1O14526 889 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 PHGDHO43175 533 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 CRCPO75575 148 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 USP1O94782 785 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 T-ENOLP0DO92 83 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 MUTP22033 750 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SLC25A3Q00325 362 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 FBXO48Q5FWF7 155 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SH2D4BQ5SQS7 431 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 MIB1Q86YT6 1006 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 MPP5Q8N3R9 675 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 SREK1Q8WXA9 508 aaKnown RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 C20orf96Q9NUD7 363 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-203ENST00000546084 CYTH4Q9UIA0 394 aa10.11□□□□□ -0.79
TRAF1-203ENST00000546084 TCEA3O75764 348 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 WFS1O76024 890 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TPI1P60174 286 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 MTA1Q13330 715 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 GNASQ5JWF2 1037 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 PLEKHA7Q6IQ23 1121 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TSHZ1Q6ZSZ6 1077 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 NIPA1Q7RTP0 329 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TFAP2DQ7Z6R9 452 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 IFNEQ86WN2 208 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 COLGALT1Q8NBJ5 622 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 RAB3IL1Q8TBN0 382 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 SDCBP2Q9H190 292 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 CXCL16Q9H2A7 254 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 CXorf49A8MYA2 514 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-203ENST00000546084 CCL22O00626 93 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 C2CD2LO14523 706 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 GRIN3BO60391 1043 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TPST1O60507 370 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ZC3H11AO75152 810 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAF1-203ENST00000546084 GPC4O75487 556 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 USP2O75604 605 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-203ENST00000546084 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
TRAF1-203ENST00000546084 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 CACNA2D1P54289 1103 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 MOGSQ13724 837 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ANO4Q32M45 955 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 LRRC74BQ6ZQY2 392 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 MIPOL1Q8TD10 442 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 PYDC1Q8WXC3 89 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 SERAC1Q96JX3 654 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 B3GALT6Q96L58 329 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 OMDQ99983 421 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 FOXP3Q9BZS1 431 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 LRRC42Q9Y546 428 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 BST1Q10588 318 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 USP4Q13107 963 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 GRIK4Q16099 956 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ACSBG2Q5FVE4 666 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ZNF280DQ6N043 979 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 FAM117BQ6P1L5 589 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ANKRD13AQ8IZ07 590 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 HDAC11Q96DB2 347 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TASP1Q9H6P5 420 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ANLNQ9NQW6 1124 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms